Detail information of GWHGAAEX012713/evm.TU.scaffold_45.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34023.00E-46Predicted membrane protein
nrgi|357464679|ref|XP_003602621.1|1.69E-53hypothetical protein MTR_3g096320 [Medicago truncatula]
Swissprottr|Q9FY84|PEN2_ARATH1.00E-46Probable gamma-secretase subunit PEN-2
trEMBLtr|G7JBL2|G7JBL2_MEDTR6.00E-54Uncharacterized protein {ECO:0000313|EMBL:AFK33820.1}
TAIRAT5G093103.00E-46Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005218678551898959-
Transcript Sequence

Network for GWHGAAEX012713

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10251.8PEN-2531411.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06170PSENEN, PEN2 Notch signaling pathway map04330

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.930
SRR2545915Juvenile tuber8.290
SRP108465SRR5643513five period of Gastrodia elata12.300
SRR5643514five period of Gastrodia elata12.860
SRR5643515five period of Gastrodia elata13.330
SRR5643524five period of Gastrodia elata13.200
SRR5643525five period of Gastrodia elata35.630
SRR5643528five period of Gastrodia elata28.540
SRR5643658five period of Gastrodia elata28.130
SRR5643659five period of Gastrodia elata14.150
SRR5643660five period of Gastrodia elata16.340
SRR5643661five period of Gastrodia elata16.510
SRR5643662five period of Gastrodia elata18.070
SRR5643663five period of Gastrodia elata14.190
SRR5643664five period of Gastrodia elata16.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.820
SRR6049655Rhizomagastrodiae_C368-T10_good_113.530
SRR6049656Rhizomagastrodiae_C368-T07_good_113.370
SRR6049657Rhizomagastrodiae_C368-T07_good_110.030
SRR6049658Rhizomagastrodiae_C368-T04_good_111.480
SRR6049659Rhizomagastrodiae_C368-T04_good_111.340
SRR6049660Rhizomagastrodiae_C368-T01_good_110.310
SRR6049661Rhizomagastrodiae_C368-T04_good_110.120
SRR6049662Rhizomagastrodiae_C368-T01_good_113.010
SRR6049663Rhizomagastrodiae_C368-T01_good_111.580
SRR6049664Rhizomagastrodiae_C368-T10_good_117.190
SRR6049665Rhizomagastrodiae_C368-T10_good_117.190
SRP279888GastroGastrodia elata tuber 11.99
JuvenJuvenile tuber8.12
Mother_GastroMother tuber of Gastrodia elata 15.54
Mother_JuvenMother tuber of Juvenile 8.20