Detail information of GWHGAAEX012715/evm.TU.scaffold_45.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|659105915|ref|XP_008453205.1|1.20E-57PREDICTED: protein DCL, chloroplastic [Cucumis melo]
Swissprottr|Q42463|DCL_SOLLC6.00E-06Protein DCL, chloroplastic (Precursor)
trEMBLtr|M5WNA6|M5WNA6_PRUPE1.00E-57Uncharacterized protein {ECO:0000313|EMBL:EMJ10763.1}
TAIRAT5G624402.00E-28Protein of unknown function (DUF3223)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005220437232045034+
Transcript Sequence

Network for GWHGAAEX012715

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11523.7DUF32231972691.00E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.620
SRR2545915Juvenile tuber54.660
SRP108465SRR5643513five period of Gastrodia elata146.040
SRR5643514five period of Gastrodia elata141.270
SRR5643515five period of Gastrodia elata130.350
SRR5643524five period of Gastrodia elata130.530
SRR5643525five period of Gastrodia elata86.750
SRR5643528five period of Gastrodia elata68.520
SRR5643658five period of Gastrodia elata68.090
SRR5643659five period of Gastrodia elata158.180
SRR5643660five period of Gastrodia elata158.680
SRR5643661five period of Gastrodia elata180.630
SRR5643662five period of Gastrodia elata144.000
SRR5643663five period of Gastrodia elata137.270
SRR5643664five period of Gastrodia elata146.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1118.870
SRR6049655Rhizomagastrodiae_C368-T10_good_1128.980
SRR6049656Rhizomagastrodiae_C368-T07_good_1130.490
SRR6049657Rhizomagastrodiae_C368-T07_good_1132.180
SRR6049658Rhizomagastrodiae_C368-T04_good_1113.130
SRR6049659Rhizomagastrodiae_C368-T04_good_1122.750
SRR6049660Rhizomagastrodiae_C368-T01_good_1130.430
SRR6049661Rhizomagastrodiae_C368-T04_good_1123.500
SRR6049662Rhizomagastrodiae_C368-T01_good_1151.820
SRR6049663Rhizomagastrodiae_C368-T01_good_1139.550
SRR6049664Rhizomagastrodiae_C368-T10_good_1178.730
SRR6049665Rhizomagastrodiae_C368-T10_good_1178.730
SRP279888GastroGastrodia elata tuber 117.92
JuvenJuvenile tuber148.41
Mother_GastroMother tuber of Gastrodia elata 38.73
Mother_JuvenMother tuber of Juvenile 69.25