Detail information of GWHGAAEX012725/evm.TU.scaffold_45.67
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2619 | 5.00E-173 | Fucosyltransferase |
| nr | gi|672116678|ref|XP_008781509.1| | 0 | PREDICTED: alpha-(1,4)-fucosyltransferase [Phoenix dactylifera] |
| Swissprot | tr|Q9C8W3|FUT13_ARATH | 2.00E-173 | Alpha-(1,4)-fucosyltransferase |
| trEMBL | tr|M0SZ83|M0SZ83_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P17040_001} |
| TAIR | AT1G71990 | 5.00E-173 | fucosyltransferase 13 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000052 | 2884909 | 2890587 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012725
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00852.18 | Glyco_transf_10 | 226 | 407 | 1.00E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT10 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14412 | FUT13, FucTC | Metabolic pathways | map01100 |
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008417 | Molecular Function | fucosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.230 |
| SRR2545915 | Juvenile tuber | 15.450 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 25.980 |
| SRR5643514 | five period of Gastrodia elata | 26.850 | |
| SRR5643515 | five period of Gastrodia elata | 23.560 | |
| SRR5643524 | five period of Gastrodia elata | 23.920 | |
| SRR5643525 | five period of Gastrodia elata | 18.430 | |
| SRR5643528 | five period of Gastrodia elata | 19.720 | |
| SRR5643658 | five period of Gastrodia elata | 25.250 | |
| SRR5643659 | five period of Gastrodia elata | 48.120 | |
| SRR5643660 | five period of Gastrodia elata | 45.400 | |
| SRR5643661 | five period of Gastrodia elata | 55.030 | |
| SRR5643662 | five period of Gastrodia elata | 43.980 | |
| SRR5643663 | five period of Gastrodia elata | 45.050 | |
| SRR5643664 | five period of Gastrodia elata | 42.960 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 33.230 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.930 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.500 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 32.080 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.460 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.090 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 31.460 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 32.910 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 57.480 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 44.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 34.900 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 34.900 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.71 |
| Juven | Juvenile tuber | 36.98 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.81 | |
| Mother_Juven | Mother tuber of Juvenile | 20.91 |