Detail information of GWHGAAEX012727/evm.TU.scaffold_45.69_evm.TU.scaffold_45.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|451948279|ref|YP_007468874.1|8.00E-30serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
KOGKOG059203-phosphoinositide-dependent protein kinase (PDK1)
nrgi|695063943|ref|XP_009420498.1|0PREDICTED: 3-phosphoinositide-dependent protein kinase 2-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q4V3C8|PDPK2_ARATH03-phosphoinositide-dependent protein kinase 2
trEMBLtr|M0RH25|M0RH25_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P10490_001}
TAIRAT3G1054003-phosphoinositide-dependent protein kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005229502892978819-
Transcript Sequence

Network for GWHGAAEX012727

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase543183.10E-64
PF14593.5PH_33884877.70E-23
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyAGC_PDK1

KEGG pathway

KO Enzyme pathway mapID
K06276PDPK1 MAPK signaling pathway - yeast map04011
FoxO signaling pathwaymap04068
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Apoptosismap04210
Focal adhesionmap04510
T cell receptor signaling pathwaymap04660
Fc epsilon RI signaling pathwaymap04664
Insulin signaling pathwaymap04910
PPAR signaling pathwaymap03320
Thyroid hormone signaling pathwaymap04919
Aldosterone-regulated sodium reabsorptionmap04960
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.990
SRR2545915Juvenile tuber4.670
SRP108465SRR5643513five period of Gastrodia elata1.230
SRR5643514five period of Gastrodia elata3.190
SRR5643515five period of Gastrodia elata1.420
SRR5643524five period of Gastrodia elata2.080
SRR5643525five period of Gastrodia elata0.870
SRR5643528five period of Gastrodia elata0.620
SRR5643658five period of Gastrodia elata0.650
SRR5643659five period of Gastrodia elata0.340
SRR5643660five period of Gastrodia elata0.180
SRR5643661five period of Gastrodia elata0.340
SRR5643662five period of Gastrodia elata0.220
SRR5643663five period of Gastrodia elata0.360
SRR5643664five period of Gastrodia elata0.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.770
SRR6049655Rhizomagastrodiae_C368-T10_good_10.600
SRR6049656Rhizomagastrodiae_C368-T07_good_10.660
SRR6049657Rhizomagastrodiae_C368-T07_good_10.690
SRR6049658Rhizomagastrodiae_C368-T04_good_10.270
SRR6049659Rhizomagastrodiae_C368-T04_good_10.440
SRR6049660Rhizomagastrodiae_C368-T01_good_10.890
SRR6049661Rhizomagastrodiae_C368-T04_good_10.910
SRR6049662Rhizomagastrodiae_C368-T01_good_11.450
SRR6049663Rhizomagastrodiae_C368-T01_good_10.730
SRR6049664Rhizomagastrodiae_C368-T10_good_11.730
SRR6049665Rhizomagastrodiae_C368-T10_good_11.730
SRP279888GastroGastrodia elata tuber 0.35
JuvenJuvenile tuber1.18
Mother_GastroMother tuber of Gastrodia elata 2.68
Mother_JuvenMother tuber of Juvenile 1.73