Gene detail

Detail information of GWHGAAEX012733/evm.TU.scaffold_45.89

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|340616862\|ref\|YP_004735315.1\|	6.00E-17	deoxyguanosine kinase [Zobellia galactanivorans]
KOG	KOG4235	0	Mitochondrial thymidine kinase 2/deoxyguanosine kinase
nr	gi\|743816914\|ref\|XP_010930780.1\|	0	PREDICTED: uncharacterized protein LOC105051845 [Elaeis guineensis]
trEMBL	tr\|A0A061FJL3\|A0A061FJL3_THECC	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 {ECO:0000313\|EMBL:EOY17251.1}
TAIR	AT1G72040	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000052	3712837	3728442	+

Transcript Sequence
>GWHTAAEX012733 ACCCTAAACCCTGTGATATCACCATTCGTCTTCTTCACCCATCCTCTACATGAGCACAAACACGGCTACCGGAAGCAGCCATGCAAAAGCTCTCGCGCGAAAGCAGACGCCGCCTTACCTCCTCCATTCCTCGTCCTGAACTCTCCATGACAGCCGCTCTGTTCCTCCGACCCATCTGCCCCTCTTCTTTAGCCAGCTACGGCCATTACCGCAGTTTCTCTCTTAGGAATCATCCCATCTTTCCAGACTCTATCAGCTGCCTCCCCATCCGGCGCATATGGTCACCATTACTCAGGCATGCTTGTGAGCCGTGTTCCTCATGGCTTTTTGCAGTGAGGAGGTTTGGGTATTCTGAGGGTTTAAGTTGCCGGGATAAGAGCAGAAGCACGGAAGATGCTGAGGAAGATGGGAAGTGTGCGGAAGAAATCGGGGAACAGTCTGGGGAAAGGAGCTGCATCGCTGCACAGCTTCACCGGAGTCAGAGGAGTGGGAGGTCAGGAGATGCTTCAACTGCTAGCGTAGACCTCCTGAGCATCCCTGGGGTCGGGCCAAGGAATTTGAGGAAACTTGTGAATAAGGGGTTTCTTGGTGTTGACAAGCTAAAACAATTTTATAAGGAAAAGTTTTATGGCAAAGCCTGCCAGAAAATGGTTGAGTTCTTGCAGAGTTCCGTTGGAATCATTCACAGAAGTCATGCAGAAAGTATAACATCTTTTATAAAAGAGAGTCTTGATGAAGAATTAAAACAAGAGAACGAGAATACAGAAGTGAAAATTTCACAGAAGAAAAGGTTGACATTTTGTGTTGAAGGAAACATCAGTGTTGGAAAGACCACTTTCTTGCAAAGAATCGCTAACGAAACAATTGAATTACGGGATCTTGTTGAGATAGTGCCAGAACCCGTCTCTAAGTGGCAGGATGTTGGTCCCGACCACTTCAATATTCTTGATGCTTTCTATGCTGAGCCAAAAAGATATGCATACACTTTCCAGAATTATGTGTTTGTAACGAGGGTCATGCAGGAAAGAGAATCTTCCAGTGGTATCAAGCCACTAAGGCTGATGGAAAGAAGCATTTTTAGTGATAGAATGGTATTTGTTCGAGCTGTTCATGAAGCAAATTGGATGAATGAGATGGAGATAAGCATTTATGATTCATGGTTTGATCCTGTTGTCTCGAGCCTGCCAGGACTTATTCCTGATGGTTTCATTTATTTGAGGGCTAGTCCCGATACGTGCCACAAAAGAATGATGCTGCGAAAGAGGGAAGAGGAGGGAGGTGTGACCTTGGACTATTTAAGAGATTTGCATGAAAAGCATGAAAGCTGGTTATTCCCCTTTCAAAATGGAGACTGTGGTTTACTGTCAGTCAGCCAATTACCCTCTCACGTTGACAATGCTTTGCATCCTGTTATAAAGGATCGCGTATTCTACTTGGAGGGAAATCATATGCACCCGAGTATTCAAAAGGTTCCCGCGTTGGTATTGGATTGTGAGCCTAATATAGATCTGAATCGAGATATTGAAGCTAAAAGACAGTATGCTCGCCAAGTCGCCGAATTTTTTTCCTTTGTGAAGAGAAAGAAAGGCGAGACTTCTGAGAAGGACGTGCCAGAAGGATCCAGAACTCCAAAAATTCTTCTTCCCAGAAAGGGCAGTTTTTGGGCCTCAGATCGGAGCCCCCCTATTCCCGATTCAGCCTTGAAATCTCTAGGTATCAGAAGAGCCATGTCATCCTTCATTTCTCTTCCCTACTGATCAATTATGCCGTCTGATCTATTATGAAGCTTCCCATTTCCACAATGGAGATTTAATTGATTTGGAATTGCAGCAAAACCTTTCTCCACCCCAAGCTGCAAGCTTTTGCAGAAGGTATTGCTCACAAAATCAATGCCTTTGCACAATCTTTTTCCTATTTTCTAATCGTGATTGCTTGCTAGCAGGTCACTGATTGTAACTTTTTGTCTGATTTGTTATCCTGTTTTGGGGAATGGGTTGTATTATAATGTAGAGTGTAAGTAGTTTTGTTAATAGCTTAGGAGTTTGCTTTTAGAAATTTTGTAACACTCGTGGTTTAATTAGTTGCTCGCCAGTTTCTGTTGTGGCTGTTTTTCAAGGCTTTTGAAGTTTAGTTTACACAATGCATGATAATTGATTGGTTGTTCTTG

Network for GWHGAAEX012733

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01712.18	dNK	240	494	5.00E-50

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.040
SRP064423	SRR2545915	Juvenile tuber	5.450
SRP108465	SRR5643513	five period of Gastrodia elata	4.900
	SRR5643514	five period of Gastrodia elata	4.750
	SRR5643515	five period of Gastrodia elata	3.860
	SRR5643524	five period of Gastrodia elata	4.430
	SRR5643525	five period of Gastrodia elata	1.380
	SRR5643528	five period of Gastrodia elata	1.050
	SRR5643658	five period of Gastrodia elata	0.380
	SRR5643659	five period of Gastrodia elata	8.380
	SRR5643660	five period of Gastrodia elata	8.720
	SRR5643661	five period of Gastrodia elata	8.600
	SRR5643662	five period of Gastrodia elata	8.410
	SRR5643663	five period of Gastrodia elata	6.800
	SRR5643664	five period of Gastrodia elata	9.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.040
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.810
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.260
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.190
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.700
SRP279888	Gastro	Gastrodia elata tuber	11.55
	Juven	Juvenile tuber	11.13
	Mother_Gastro	Mother tuber of Gastrodia elata	3.14
	Mother_Juven	Mother tuber of Juvenile	4.27