Detail information of GWHGAAEX012736/evm.TU.scaffold_45.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720093416|ref|XP_010246044.1|3.06E-39PREDICTED: cytochrome b-c1 complex subunit 8-like [Nelumbo nucifera]
Swissprottr|P46269|QCR8_SOLTU9.00E-38Cytochrome b-c1 complex subunit 8
trEMBLtr|A0A067LMN1|A0A067LMN1_JATCU8.00E-39Uncharacterized protein {ECO:0000313|EMBL:KDP45674.1}
TAIRAT5G053706.00E-34Cytochrome b-c1 complex, subunit 8 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005238000663820565-
Transcript Sequence

Network for GWHGAAEX012736

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10890.7Cyt_b-c1_81723.30E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0022900Biological Processelectron transport chain
GO:0008121Molecular Functionubiquinol-cytochrome-c reductase activity
GO:0005743Cellular Componentmitochondrial inner membrane
GO:0070469Cellular Componentrespiratory chain

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms97.380
SRR2545915Juvenile tuber167.040
SRP108465SRR5643513five period of Gastrodia elata215.180
SRR5643514five period of Gastrodia elata311.820
SRR5643515five period of Gastrodia elata271.650
SRR5643524five period of Gastrodia elata310.240
SRR5643525five period of Gastrodia elata366.460
SRR5643528five period of Gastrodia elata405.980
SRR5643658five period of Gastrodia elata359.090
SRR5643659five period of Gastrodia elata164.760
SRR5643660five period of Gastrodia elata153.900
SRR5643661five period of Gastrodia elata171.290
SRR5643662five period of Gastrodia elata142.440
SRR5643663five period of Gastrodia elata155.630
SRR5643664five period of Gastrodia elata140.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1132.320
SRR6049655Rhizomagastrodiae_C368-T10_good_1335.360
SRR6049656Rhizomagastrodiae_C368-T07_good_1146.710
SRR6049657Rhizomagastrodiae_C368-T07_good_1117.740
SRR6049658Rhizomagastrodiae_C368-T04_good_182.430
SRR6049659Rhizomagastrodiae_C368-T04_good_181.680
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.800
SRR6049661Rhizomagastrodiae_C368-T04_good_190.870
SRR6049662Rhizomagastrodiae_C368-T01_good_1160.960
SRR6049663Rhizomagastrodiae_C368-T01_good_1136.640
SRR6049664Rhizomagastrodiae_C368-T10_good_1217.350
SRR6049665Rhizomagastrodiae_C368-T10_good_1217.350
SRP279888GastroGastrodia elata tuber 146.68
JuvenJuvenile tuber211.00
Mother_GastroMother tuber of Gastrodia elata 181.49
Mother_JuvenMother tuber of Juvenile 158.29