Detail information of GWHGAAEX012737/evm.TU.scaffold_45.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21010Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s)
nrgi|743764374|ref|XP_010912391.1|0PREDICTED: uncharacterized protein LOC105038321 isoform X2 [Elaeis guineensis]
trEMBLtr|K4B3A6|K4B3A6_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g108920.2.1}
TAIRAT2G159000Phox-associated domain;Phox-like;Sorting nexin, C-terminal

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005238253373910078-
Transcript Sequence

Network for GWHGAAEX012737

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02194.14PXA1062824.00E-33
PF00787.23PX5096121.80E-14
PF08628.11Nexin_C7979306.20E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0035091Molecular Functionphosphatidylinositol binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.030
SRR2545915Juvenile tuber18.510
SRP108465SRR5643513five period of Gastrodia elata8.050
SRR5643514five period of Gastrodia elata8.250
SRR5643515five period of Gastrodia elata8.710
SRR5643524five period of Gastrodia elata9.490
SRR5643525five period of Gastrodia elata11.780
SRR5643528five period of Gastrodia elata14.810
SRR5643658five period of Gastrodia elata14.120
SRR5643659five period of Gastrodia elata10.310
SRR5643660five period of Gastrodia elata11.750
SRR5643661five period of Gastrodia elata8.670
SRR5643662five period of Gastrodia elata10.740
SRR5643663five period of Gastrodia elata10.110
SRR5643664five period of Gastrodia elata10.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.820
SRR6049655Rhizomagastrodiae_C368-T10_good_18.770
SRR6049656Rhizomagastrodiae_C368-T07_good_110.180
SRR6049657Rhizomagastrodiae_C368-T07_good_113.030
SRR6049658Rhizomagastrodiae_C368-T04_good_111.900
SRR6049659Rhizomagastrodiae_C368-T04_good_116.720
SRR6049660Rhizomagastrodiae_C368-T01_good_110.130
SRR6049661Rhizomagastrodiae_C368-T04_good_112.430
SRR6049662Rhizomagastrodiae_C368-T01_good_17.970
SRR6049663Rhizomagastrodiae_C368-T01_good_19.520
SRR6049664Rhizomagastrodiae_C368-T10_good_18.730
SRR6049665Rhizomagastrodiae_C368-T10_good_18.730
SRP279888GastroGastrodia elata tuber 13.16
JuvenJuvenile tuber10.72
Mother_GastroMother tuber of Gastrodia elata 14.21
Mother_JuvenMother tuber of Juvenile 12.90