Detail information of GWHGAAEX012738/evm.TU.scaffold_45.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672207816|ref|XP_008779883.1|1.59E-54PREDICTED: dof zinc finger protein DOF3.5-like [Phoenix dactylifera]
Swissprottr|Q9SVC5|DOF35_ARATH3.00E-35Dof zinc finger protein DOF3.5
trEMBLtr|J3M7L3|J3M7L3_ORYBR2.00E-50Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G25870.1}
TAIRAT3G524401.00E-34Dof-type zinc finger DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005240409964042920-
Transcript Sequence

Network for GWHGAAEX012738

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof32863.60E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.120
SRR2545915Juvenile tuber3.280
SRP108465SRR5643513five period of Gastrodia elata1.770
SRR5643514five period of Gastrodia elata1.630
SRR5643515five period of Gastrodia elata2.530
SRR5643524five period of Gastrodia elata1.950
SRR5643525five period of Gastrodia elata7.780
SRR5643528five period of Gastrodia elata4.810
SRR5643658five period of Gastrodia elata6.870
SRR5643659five period of Gastrodia elata2.150
SRR5643660five period of Gastrodia elata2.750
SRR5643661five period of Gastrodia elata4.550
SRR5643662five period of Gastrodia elata6.840
SRR5643663five period of Gastrodia elata5.100
SRR5643664five period of Gastrodia elata6.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.010
SRR6049655Rhizomagastrodiae_C368-T10_good_11.650
SRR6049656Rhizomagastrodiae_C368-T07_good_13.070
SRR6049657Rhizomagastrodiae_C368-T07_good_12.330
SRR6049658Rhizomagastrodiae_C368-T04_good_11.400
SRR6049659Rhizomagastrodiae_C368-T04_good_10.970
SRR6049660Rhizomagastrodiae_C368-T01_good_11.520
SRR6049661Rhizomagastrodiae_C368-T04_good_12.340
SRR6049662Rhizomagastrodiae_C368-T01_good_12.490
SRR6049663Rhizomagastrodiae_C368-T01_good_12.050
SRR6049664Rhizomagastrodiae_C368-T10_good_11.800
SRR6049665Rhizomagastrodiae_C368-T10_good_11.800
SRP279888GastroGastrodia elata tuber 4.05
JuvenJuvenile tuber0.78
Mother_GastroMother tuber of Gastrodia elata 7.63
Mother_JuvenMother tuber of Juvenile 1.48