Detail information of GWHGAAEX012744/evm.TU.scaffold_45.112
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|479149505|ref|YP_007779934.1| | 9.00E-19 | Serine/threonine protein kinase [Roseburia intestinalis XB6B4] |
| nr | gi|672207678|ref|XP_008779807.1| | 1.34E-99 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Phoenix dactylifera] |
| Swissprot | tr|Q39202|RLK1_ARATH | 4.00E-77 | G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor) |
| trEMBL | tr|G7JCX3|G7JCX3_MEDTR | 1.00E-96 | S-locus lectin kinase family protein {ECO:0000313|EMBL:AES91505.2} |
| TAIR | AT5G60900 | 8.00E-79 | receptor-like protein kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000052 | 4598782 | 4600145 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012744
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 135 | 404 | 3.30E-42 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_SD-2b |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.960 |
| SRR2545915 | Juvenile tuber | 1.160 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.510 |
| SRR5643514 | five period of Gastrodia elata | 4.170 | |
| SRR5643515 | five period of Gastrodia elata | 5.250 | |
| SRR5643524 | five period of Gastrodia elata | 4.170 | |
| SRR5643525 | five period of Gastrodia elata | 6.610 | |
| SRR5643528 | five period of Gastrodia elata | 9.280 | |
| SRR5643658 | five period of Gastrodia elata | 2.600 | |
| SRR5643659 | five period of Gastrodia elata | 4.600 | |
| SRR5643660 | five period of Gastrodia elata | 3.940 | |
| SRR5643661 | five period of Gastrodia elata | 5.050 | |
| SRR5643662 | five period of Gastrodia elata | 4.720 | |
| SRR5643663 | five period of Gastrodia elata | 4.890 | |
| SRR5643664 | five period of Gastrodia elata | 3.490 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.210 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.350 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.170 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.430 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.750 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.760 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.120 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.530 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.320 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.320 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.61 |
| Juven | Juvenile tuber | 7.01 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.78 | |
| Mother_Juven | Mother tuber of Juvenile | 6.48 |