Detail information of GWHGAAEX012754/evm.TU.scaffold_45.126


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695013266|ref|XP_009393411.1|2.79E-29PREDICTED: G-box-binding factor 4-like [Musa acuminata subsp. malaccensis]
Swissprottr|P42777|GBF4_ARATH1.00E-19G-box-binding factor 4
trEMBLtr|M0SGW3|M0SGW3_MUSAM1.00E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P22470_001}
TAIRAT5G440807.00E-21Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005250753505079081-
Transcript Sequence

Network for GWHGAAEX012754

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_11471971.40E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
K14432ABF Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.420
SRR2545915Juvenile tuber19.200
SRP108465SRR5643513five period of Gastrodia elata27.500
SRR5643514five period of Gastrodia elata18.760
SRR5643515five period of Gastrodia elata19.150
SRR5643524five period of Gastrodia elata14.980
SRR5643525five period of Gastrodia elata8.060
SRR5643528five period of Gastrodia elata3.250
SRR5643658five period of Gastrodia elata11.160
SRR5643659five period of Gastrodia elata10.910
SRR5643660five period of Gastrodia elata10.680
SRR5643661five period of Gastrodia elata12.200
SRR5643662five period of Gastrodia elata13.230
SRR5643663five period of Gastrodia elata13.360
SRR5643664five period of Gastrodia elata14.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.760
SRR6049655Rhizomagastrodiae_C368-T10_good_143.490
SRR6049656Rhizomagastrodiae_C368-T07_good_139.270
SRR6049657Rhizomagastrodiae_C368-T07_good_125.940
SRR6049658Rhizomagastrodiae_C368-T04_good_125.940
SRR6049659Rhizomagastrodiae_C368-T04_good_119.970
SRR6049660Rhizomagastrodiae_C368-T01_good_115.220
SRR6049661Rhizomagastrodiae_C368-T04_good_117.510
SRR6049662Rhizomagastrodiae_C368-T01_good_119.880
SRR6049663Rhizomagastrodiae_C368-T01_good_128.780
SRR6049664Rhizomagastrodiae_C368-T10_good_170.760
SRR6049665Rhizomagastrodiae_C368-T10_good_170.760
SRP279888GastroGastrodia elata tuber 8.45
JuvenJuvenile tuber4.91
Mother_GastroMother tuber of Gastrodia elata 16.88
Mother_JuvenMother tuber of Juvenile 12.80