Detail information of GWHGAAEX012763/evm.TU.scaffold_45.141


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|448821385|ref|YP_007414547.1|3.00E-08ATP-dependent DNA helicase RecQ [Lactobacillus plantarum ZJ316]
KOGKOG03511.00E-16ATP-dependent DNA helicase
nrgi|719977579|ref|XP_010248891.1|1.91E-25PREDICTED: ATP-dependent DNA helicase Q-like 5 isoform X2 [Nelumbo nucifera]
Swissprottr|Q0WVW7|RQL5_ARATH3.00E-17ATP-dependent DNA helicase Q-like 5
trEMBLtr|W9RKK3|W9RKK3_9ROSA5.00E-22ATP-dependent DNA helicase Q-like 5 {ECO:0000313|EMBL:EXB94971.1}
TAIRAT1G278801.00E-16DEAD/DEAH box RNA helicase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005257611955784060-
Transcript Sequence

Network for GWHGAAEX012763

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.630
SRR2545915Juvenile tuber12.730
SRP108465SRR5643513five period of Gastrodia elata19.960
SRR5643514five period of Gastrodia elata20.740
SRR5643515five period of Gastrodia elata27.210
SRR5643524five period of Gastrodia elata18.050
SRR5643525five period of Gastrodia elata39.030
SRR5643528five period of Gastrodia elata31.590
SRR5643658five period of Gastrodia elata23.640
SRR5643659five period of Gastrodia elata24.470
SRR5643660five period of Gastrodia elata25.250
SRR5643661five period of Gastrodia elata27.900
SRR5643662five period of Gastrodia elata28.730
SRR5643663five period of Gastrodia elata30.660
SRR5643664five period of Gastrodia elata22.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.710
SRR6049655Rhizomagastrodiae_C368-T10_good_113.840
SRR6049656Rhizomagastrodiae_C368-T07_good_115.690
SRR6049657Rhizomagastrodiae_C368-T07_good_116.620
SRR6049658Rhizomagastrodiae_C368-T04_good_131.550
SRR6049659Rhizomagastrodiae_C368-T04_good_132.950
SRR6049660Rhizomagastrodiae_C368-T01_good_117.650
SRR6049661Rhizomagastrodiae_C368-T04_good_117.850
SRR6049662Rhizomagastrodiae_C368-T01_good_112.430
SRR6049663Rhizomagastrodiae_C368-T01_good_114.220
SRR6049664Rhizomagastrodiae_C368-T10_good_115.620
SRR6049665Rhizomagastrodiae_C368-T10_good_115.620
SRP279888GastroGastrodia elata tuber 51.19
JuvenJuvenile tuber18.08
Mother_GastroMother tuber of Gastrodia elata 69.59
Mother_JuvenMother tuber of Juvenile 45.99