Gene detail

Detail information of GWHGAAEX012772/evm.TU.scaffold_46.10

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1988	8.00E-33	Uncharacterized conserved protein
nr	gi\|672204604\|ref\|XP_008778957.1\|	9.32E-95	PREDICTED: uncharacterized protein LOC103698693 [Phoenix dactylifera]
trEMBL	tr\|M0SB58\|M0SB58_MUSAM	2.00E-85	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P02400_001}
trEMBL	tr\|M0SB58\|M0SB58_MUSAM	1.00E-08	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P02400_001}
TAIR	AT4G20060	8.00E-33	ARM repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000042	572563	584753	+

Transcript Sequence
>GWHTAAEX012772 ATGGTTGAAAGAGAAAAATTCTGGGAAGTATACAGAGCTGGAAAATATTCTTGTTCACTAGGTCTCTGGTTTGCTGCTACTTTTTCATTTCGTAAGTTGGTTAATGTTACAAAATCAGGATATTACAGTAACTGGATTAAAGCTTTGATGTTGTATGTTGGTGGTGAAAGTGAAATCAAACTGCTACTTTTTCCCAAATTAGGTTTGCAGTTGGTTAATAGCTTCCAGTTTGCTGCTGAGAGTGACCAACCGCTTAACTATTGTGGAGAAGAAACAGATTCATGTTTTGGTGAGGGATTTGATTGTAATAGTTTTATAGGAAGTCTTTCTAGGGTTTGTAGCAAAATTTGCTCTTCTGAAAAAGTTTTGGAAGACTCTGCTGATTTCAGTGATTCTTTTTTATTTCAAAGATGGTTTCTTAATTTTAGACACAGGTTTCTTGAAAATGTGGTGGAAACTCTTAGACTTTTGGGACCGAATGCATTTACAGGGGATAAATTTAATAGCTCCTTTCTTCCTGTGAATTCAGCAAAACTTATTCACGAAATGCATGAGCTTGTATGTTGTTTGACTATGGTATCTTTTCAGTTCTATGATTTAGCTAAAAGCTATGATCTTCTAGCTACATCTTTTATGGATATCGATGCAGCAAGATTTAGAGGCATCTCAAGGCTTGGTGTGACTTGTTCCACCCTTGCTTTTCGTACTTCTATTGCTATGACTGTTGTAAATTCGACTGCTTTCAGAAATATCATGCCTTCAAGTGCGGATAATCTTGAAAGTTTTTCAAATCTGAAGATTGTACAAGATTTAGCTGAGCGCATGTGGGATATTGAATGCTCAACGGCAAAGAAACTCATGCACTTACACTTGGTTAAAGATAAGATCAAACATGAAGTACGCTCCATAATGAATTTACATGGTTCAAATTTATTTGACAATGTTTCTCTATCACACATCCTATTTGCTATAAATGGTATTTTATGCGTTCAAGCTGATTTAGAGGCGGCCAAAGATGTGGAGGATCTAATCGCAGTTTTTCTGCATAGTTTACAACATCTTTGTTTCTCCATTAGGAAATTGATGGGAATTTCTATTGTCACTCCCAAGTATTTTTTTAAAGTGAGGCCTTGTATTGGCTCAGAGCTCTTTATTTTTCACGCAAATTCTGAACATAAAGATGAGCTATGTGTTAGGCCTGGTTTCCAGTTGCCGTTGAATCTTTGTATTCAACTTAAGAACACATCAGTTATAAAATGTGCTCGTATATCTAAGATCTACTGCATTGTTTCTGTAAGCGCAACTGATTGTTTCACCATTGAAAATGGAAGAAGGGTAGCTCCAGCACAAAGTGCTATTCAAACTCACAAGGCTGACATGTTACGGTTGAGTGAGAATGATGGTATCACTTCTGAGGCAATTTTACAAAATGAAGATGATGGTGAAAAGCTTGATTTCCTGCAGTCATTTCTAAGCCTTGAATATCCTATCTCTTTGAAGGCTGGAGCTTTAAGATGCCTTAATATTCTGCTTGATGAAGGTTCTTACCATTTTATTGTCTGCAAGCATGTTTTTTCTGCACTAATCAATATCTTTGATGATGGTGAACTTCCTTTTAATCTCCAATGCTTGTCTTTGCAGATTCTCCGAAAGATATTCCTTAATAGGCCACTAAATCTACCAATTTCAGACGAACCTGATTTACTGAAGGTAGTTTTAGTTTCAAAGAATGTGGATACAGTTAAGTCAAAAAGAGGTCTTGCTCTTTCTCTTCTTGTAGATCTAGTGTGCTCCATAAAGGCTGGTGGAGAAGGGCATTCTCTTTCTTTTGCAAGTTTGCTTTCTAGTGTTGCCCAACTCCATGGTAATTCACTCTCTAGATCGCTGACTTCTAGTGTTGAAGTCAATCCAACACTACTCATTAGCAATGCTTCTCTTTCTATTATGGATTAA

Network for GWHGAAEX012772

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.520
SRP064423	SRR2545915	Juvenile tuber	5.880
SRP108465	SRR5643513	five period of Gastrodia elata	2.950
	SRR5643514	five period of Gastrodia elata	2.140
	SRR5643515	five period of Gastrodia elata	3.240
	SRR5643524	five period of Gastrodia elata	2.390
	SRR5643525	five period of Gastrodia elata	3.300
	SRR5643528	five period of Gastrodia elata	2.490
	SRR5643658	five period of Gastrodia elata	2.520
	SRR5643659	five period of Gastrodia elata	3.840
	SRR5643660	five period of Gastrodia elata	3.780
	SRR5643661	five period of Gastrodia elata	4.220
	SRR5643662	five period of Gastrodia elata	3.380
	SRR5643663	five period of Gastrodia elata	3.700
	SRR5643664	five period of Gastrodia elata	3.140
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.990
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.680
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.500
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.720
SRP279888	Gastro	Gastrodia elata tuber	4.20
	Juven	Juvenile tuber	4.16
	Mother_Gastro	Mother tuber of Gastrodia elata	2.34
	Mother_Juven	Mother tuber of Juvenile	4.08