Detail information of GWHGAAEX012777/evm.TU.scaffold_46.21
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0156 | 1.00E-21 | Cytochrome P450 CYP2 subfamily |
| nr | gi|743886054|ref|XP_010910057.1| | 7.33E-29 | PREDICTED: cytochrome P450 71A9-like, partial [Elaeis guineensis] |
| Swissprot | tr|P93530|C71D6_SOLCH | 2.00E-25 | Cytochrome P450 71D6 |
| trEMBL | tr|V7BTR6|V7BTR6_PHAVU | 2.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:ESW20440.1} |
| TAIR | AT3G53280 | 1.00E-21 | cytochrome p450 71b5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000042 | 1000205 | 1000918 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012777
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 2 | 97 | 4.70E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71A25 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.850 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.550 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.390 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.630 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.620 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.270 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.860 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 30.780 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.470 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.570 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.570 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 49.87 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 2.64 |