Gene detail

Detail information of GWHGAAEX012779/evm.TU.scaffold_46.23

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672176606\|ref\|XP_008808372.1\|	0	PREDICTED: uncharacterized protein LOC103720448 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|A0A061F0C4\|A0A061F0C4_THECC	0	Uncharacterized protein isoform 1 {ECO:0000313\|EMBL:EOY10353.1}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000042	1031779	1128946	-

Transcript Sequence
>GWHTAAEX012779 CGACCGCTTAAGCCACTCTCTCGCTGGATATTGCGTCTCCCCTCGGTTGTTGATCGACAAAGTTGGGATTTCCATTGGCGCTTTAACCTGAAGAACCAAATGGATATGGAGTTGGATCCCAGAGTGAAGCCTCTGCCCTACAAAGTTAAGGCAACGTCTCGAGAGTCTGCCGCCGGGAAGGGTGGGAACATTCTCGACCCCGATTTACGTACGCATTGGTCTACAGGAACAAATACCAAGGAGTGGATCCTCCTCGAGCTCGACGAAGCATGCCTCTTATCAAATGTACGGATTTACAATAAATCTGTTCTTGAATGGGAAATAACTGTTGGGTTGCGGTACAAGCCTGAAGCATTTGTCAAGGTTCGTCCACGATGTGAAGCTCCTAAACGTGATATGAGTTATCCTACAAACTACACACCTTGTCGTTACGTTCGTTTATCTTGCTTGCGTGGGAACCCTATAGCTGTTTATTTTATTCAGCTGATTGGCGTAACTGTAAAAGGATTGGAACCAGAGTTACAGCCTGTTATAAATTATTTGCTACCGCATATTTTATCACACAAACAAGATGCTCATGATATGCATCTCCAGTTACTTGAAAATATTGCCAGTCGGCTGCTAGTTTTTCTTCCACAACTTGAGATAGAGCTTAGTACATTCACAGATGCTTCCGATTCTAACATTATATTTTTGGCAATGCTTGTTGGGCCATTTTATCCTATTCTTCAAATTGTGAACGAAAGGGAAGCTGTGAAGGGATCTGCTATTTTCCCTGATTCAGAAATGTCCAGAAATAATCAAGCGTCTATCATAACTGTGTCCTCAAATTTTGAGGTTCAGCCAAGAAGATCGCGCAACCAATCATTGTGTATGCAATCTTGTTCATGTCCTTTGGCATTTGGCTCTGATGCTGCCATTTTACTGTTAAGAAGGGCATACAAGGATTTACCTCTTGGAATTGTTTGTAGAGCGGCTGCAAGAGCTCTACAAAAAATTATAGGGCCGATTATCCCCCTAGCGCATCCAATACACATTAGTGAATCAGCATTGTCTTCCATGTCAGATGAAACAACTGCATCTGCAGTTCATGCAGATATTACTGATTATTCAGTTTTGTTTGGAAAAGAATTTGAAGTAGCTAATGAAAGCTGGAATGCTAATCTTGTGAACGTGCTTGATATTGCTTCAGTTGAAGAAGGCATTCTTCATGTTCTCTATGCTTGTGCATCACATCCTCTGCTCTGCTGTAGGTTGGCTGAGAGTAACTTAGAATTTTGGTTAATATTGCCACTTATACAAGCATTGCTCCCAGCTCTGCGCCCTCCCATCAGTTTTCTAGATCGAGTGGATGAGTCATTTGGGCAGTGGAAACATCCTTCCGTTGAACAAGCTCTTTCACAGATAGTGATATTATCTTCTTCACCAATTTATCACCCTCTTCTTCATGCTTGTGCGGGATATTTAGCCTCCTATTCTTCATCTCATGCAAAATCAGCTTGCGTACTTGTTGATCTCTGTACTGGATTGTTTTCACCCTGGATATCTACAGTTACAGCAAAGGTGGATTTGGCAATTGAGCTTATGGAGGATCTCTTGGGTATAATTCAGGTGTCTCATCAGTCTATTACCCGTGTGCGAATTGCTTTGAAGTGCATCCTATTGGGTTTGTCAGGGCAAATAGATGATGTATTAGCTAAGTATAAGGAACACAAGCGCAAACTGCTCTTTCTCATTGAAATGCTAGAACCTTTTCTAGATCCTGTCATATTTTCTGTGAATAATACCACACCTTTTGGAGGTGCATCTTCTATCTCCTTGGTAAAGCAAGAGAATAATTGCTTTTTTGCACTTAATATTATCCGTGAAGCTGTGAGAAGGCCTACTATTCTTCCATCCTTGGAGTCTGAATGGACACGTGGATCTGTTGCTTCAAGTGTGATTCTTTCCATCCTAGGACCAAATATGCCATTGCCTTCTGATATTGATCTTTTTAAATGTTCAACTGCTAAAGTTGCTGAGTCAGGCATTTCTATTCCCTCAAATGCATCTATCTCTAAATTGAGTACTTCTAGTGATGTAGATGGAAAAATTGATGGAATTAATAATGTAGTTAAATTTGATGTTCTTGAAGAAGCTGGTCTTCTATTTGCTCCGCAAGATTTGAAAAATACACTGTTTACAAATTTTGCTGACCATTGTATGGGAGATATTCCTGGAAGATGTTGTGAACCAACTAATGGTGGTAATGAAGATAAAAAGAAGACAACTTGGATATTGATGAACCACTTTCAGTTGGATAGCAGTTTATTCAGTGATTATTTCAATTTGAAATTGAATTATTTAAAATTAACAAACCTCCATGAATGTGAACTCAGAGCTGCTGCGTTTCAACAGCTAGCGCTAGGTTTATCTTCTCAGTGTGATATTACTGCAGAAGGCTATGATGCTGCAGTTGATGCATTTATCTTAGCTGCCGAATGTTTCATCAATCCTTTCTTTATGATATCTTTCACACCCAATTCTAAGCTTTCTAAACACCTGAAACTTGTTAAATCTATGATTAATCAAAGCAGCAGCATAATGGAACTTAAAAAGGATTTTCTGAAAACGGTAGCTGAATTGGAGATTATTTCTCATCTTGAAAGAAAGAGAGACAAAATTGTTCTTGAGATCCTAATTCAGGCTGCTAAAGTGAACAGGGAATCTAGATTAGGAAACTCAAAATCATGTTCAGGTGATATTGAGCACAGCAAGCAGAGCATAAACACACTTCCCCATGATACTAAGGATATTGATGCAGTTACATTGCTTCGGCAGAATCAAAATTTGTTATTTGAGTTTGTAATTCAGCAATTGCAAAGGGAGCATCATTTGTCACATGAAGTTCTCCTGCAGGCTTTATTATTTCTTTTGCAATCTGCTACTGAACTTTTGTGCCCTCCTGAGTTTATTATTGACATAATACTGTTATCAGCTGAGAGCCTTAGTATGCTTCTTATGTCTCAGTATAATAAACTTGAAAAAGGAATTACACAGTTTGATTTGGAAAAGTTGCATGGGTTGCAGAGGTTCTGGTTACTTCTTGAAAGAATTGTCGAAGCATCTTCTGGCAGTGATGTAAAATCTGGAAGAGCTTCATATGGATTCCAATGTTATAGCTTAATTCCTCTTTCATCATGGATAAACAAGATATCAAAGTTTTCAAATGCTAGTCCCATTGCTCGTTTCCTTGGGTGGATGGCTGTGTCCCGTTATGCAGAACAATATCATAAGGAACGCTTGTTCTTTGCATCGGATCTCTCACAACTTACATTGCTACTAACTATTTTTGCTGATGAACTCACATTTGTGGATAATTCATTACAGCTGAAAGTAGAAGAAGAAATAAGTTTCAAGCAAGCTGATACCTTTGCACAACTTGAGAGGGAGTCCTCTCATTCATATGCTTCTGACCAAGATGATTCTTTTCATATTCTTTATCCTTCCATGCATAAATTTTTTCCAAATATGAGAAGGAAATTTAGAACTTTTGGTGAGACAATCCTGGAGGCTATTGGCTTACAATTAAAATGTCTTCCCTCCAATTCCGTTCCAGAAATACTTCGTTGGTTTTCTGATTTATGCATGTGCCCATATGTTGAAGCCATGAAAATTCGAGATCTTGCTTCTTTAAGTTCATTTGATTGTTTAAGAGGATATACTGCTACAAATGCTAAAGTGATAGTCCTATACATTTTAGAATCCCTTGTTACTGTGCATATAGAATCAATGCTTCCTGAGATGGCTAGGGTGGCACAAATATTGATATCACTATGCAAAACATCATATTGTGATGTAGCATTTATGGAGTCTGTACTGCATCTGTTAAAGCCTTTCATCTCTTTCTTTCTGAAGAAGGCAACATTGAATGAAAAACTGTTGGCTGATGCATTGCCCTGCGAAGATTTTGAGTTAAATTTTTATGCACTATTTGATAGCATCAAGCACAAGAGAGAACTGCAGAACAGTTCTGGGGTAAATAGATTTCAAGGATCCTTGATGATCTTTATTTTGGGCGATCTCTTTCTTGATTTGTCTTTAAAGAGAAAGATTGATATTTTGGAGTCATTGTGCTTGTGGACTGGCTTTACTTCATCAGAGCTGACCTCTTCTTTCCCTAATTATCTTTGTGCATTCAAGAAGATCTTTGATAGTTGTGAAATGCTATTGGAAGGACAACTAAAATGCTTTGACTTCATAATACCCAGTAAGGAGCAAGAAGTAATGGTAAGCCTTATTGACAAAACAAAATTATCTCATGATTTTTCTGGGTATGGAGATCAGAGACATACAACCAAGCCTGCAAAGGATTTTATTAGTAGTGAGTCATTTATAGATGTCCCAGATCGAGAACCTTATCTTTTTTCCATTGAAGAAATGAAAGAATGCTCAGAAGTATTGGAAAGGCTAATTCTGAAGCTTATTCCTGAAATAGAGAAGTGCTGGAAACTACATTCTAAATTTGTAAACGAACTCACCTTGAAGATAGCACGATGCTTTTTGTTTTCTAGATGCTTGAAATTTATTGGTCTATCAGGTTCTGTAATTAGTTCTAGTAATGATGGAACCACACCCTATGCTAGTCCTCGTGACCTTCCATACATTTGGGACAATAGTCTGCAAGGCCTTGCAAAAACTTTAGTAGAATTTCAAGAAAATGAATGCTGGCATACAACATCTGTCATTCTGGACTATCTTCTTAGCTTGCCACAATCCATCTCGCTTGATTCATGTATTAGTAATATATGCTCGTTAATAAAGCAATTTTGTGTTTGTGCCCCATTGATATCATGGAGATTGCAGACTGATAAATGGCTGACCTATTTGTTTATGAGGGGAATTGGAAATACTGATGTATTAAAGGATTCATTGGTTGATTTGCTTGGCACAATGTTGAGTCATGGTGAACCTGAACAACGAGCTGTTGCACTGCACCACCTTGGAGTAATGGTTGGCTTAGATACCTATGATAGAGCAGCCATGCTATCTCTTACATTTCATTCAAATTTGGGTGGGTATGAGCCAGCGACATCTCTTTCTGAATCAGTTATTTCGACTTTGGTTTCAAATACTTGGGATAGGGTGGCATCCTTGATATTGTCTGAACCTTCTATAATGCTAAGATCACATGCAATGGCGCTCCTGTCTGGTTATGTTCCCTTTGTGACTCGTTCACAGTTGCAGTCGTTTCTTGTATCTTCTAGTAATATCTTACAGGGTTTTGGAAGGTTTTCCCCTTTATTGGAAGGTCATTTGACACGTCTTTCATTAGGCCTTCTTGCAAGTGCGTGCTTATACTCTCCATCTGAGGATATAACATTGATACCTGAAAGTATTTGGAAAACTTTGGAGCAGATGGGAACTTCTAGAACTGGATGGCTTGATGATGTGGAGAAGAGCGTTTGTTTAGCATTGTGCAAACTTCAAACTGAATTTGTTGATGGAAAAGGGGCACTTAAAGAGGCATTGATACAAGCTTCAACTACAAAATCAAGTGATTTTGATTTTAAAAACATTCGTGAATCGATTCTTCAGGTTCTTCCGTGTCTAACATCCGCTCGAGCATACTTTGAATTTTTTTCTAAGAAAGCTGATAAAGAATCTCAGGAACTAGAGGAAGCTGAAATTGAAATAGAACTTCTTCAAAAAGAGAAGGCGATGCAAGAAGTGCTAGGCGATTCAAAGAACCTTCTTAATCACAAGGACGATAACCGCCTTCAACAAATAAAAGATGATATCCGCTCTTTAGAGCGCTCTAAACTTAAAGAAGAGGTTGCAGAGCGTATGCTAAAGAAGCTTGCCATGAGGCGTACTCGTAAAAAAGTTTTAGATGAGATAGCTTTACAAGAAATGAAACTCTTGGAGGAACTTGACAGGGATAGGAAAAATGAACAGGAGCAAGAGCTAGAGAGACAGCGGCAATTAGAACTTGAACATGCCCGAACTAGGGAACTTCAGTTCAATCTTGATATGGAACGGGAAAGGCAAAGTCAGAGAGAACTTCAAAGAGAACTGGAATTGGTGGAATCTGGGGTTCGGTCATCTCGGAGGGAATTCTCCTCTAATTCTAGCAGTAGGCCGAGGGAAAAATTTCGGGAGCGAGACGCCGGGAGGTCCGGACTTGAGGGAAGTCTGAGGCCTGGTATCAAAGGTCAGGAGAGCTGCAATGCGATCCAAACATCCAGTTGTTCGTTATCCTTGTCGTCACCGACGGTGGTGCTCTCTGGCTCGAGGCCCTTTTCGGGCCAGCCTCCAACCATACTGCAGTCAAGGGAGAGGCCGGCCGAGCGCGGGAGCACCACTTATGAGGACAGTCTCGAGGGAAGCAGAGATTCGGGAGATGCAAATAGTGCTGGTGATCCCGAGCTGTCTTTGGCCTTTGATGGGCCACCCAGGCGAGGCAGCAAGTCAAGGCAGGTGGTGGAACGGAGAGACAGGGAAGCGAGGCGTGAAGGAAAATGGGAAAGGAAGCACGCCTAATGGCCGGACAGATTCTTCTGTGCTCTGGGAGCTTAATCCTTCTCCCTCTTCTTCTGAAACAATTGAATGCAAGCGGAATTCCAGATTGGCAGCAGCCTTGCGTCTCGTGGCTCAGTTTTGAATCACAAGTGGGTGAAAATATTTTAATAACGCGCTTGTTTTGTGGGACTCTATTAAGTTTTTTATATTTTAGCTTCAAAGCTGACGGCTGGACTATATTACATGTTTTAATTTAATTATGTGCACATGGAGCTTGCAGACTCCAACTCGAACGCCAAATATTTTGAATTGATTTGAACTCATCTCAAAATTTTTGAGTCGACTTCGATTCGAACAGTTTGACTCGAAACATAT

Network for GWHGAAEX012779

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX012779
RPLKPLSRWILRLPSVVDRQSWDFHWRFNLKNQMDMELDPRVKPLPYKVKATSRESAAGKGGNILDPDLRTHWSTGTNTKEWILLELDEACLLSNVRIYNKSVLEWEITVGLRYKPEAFVKVRPRCEAPKRDMSYPTNYTPCRYVRLSCLRGNPIAVYFIQLIGVTVKGLEPELQPVINYLLPHILSHKQDAHDMHLQLLENIASRLLVFLPQLEIELSTFTDASDSNIIFLAMLVGPFYPILQIVNEREAVKGSAIFPDSEMSRNNQASIITVSSNFEVQPRRSRNQSLCMQSCSCPLAFGSDAAILLLRRAYKDLPLGIVCRAAARALQKIIGPIIPLAHPIHISESALSSMSDETTASAVHADITDYSVLFGKEFEVANESWNANLVNVLDIASVEEGILHVLYACASHPLLCCRLAESNLEFWLILPLIQALLPALRPPISFLDRVDESFGQWKHPSVEQALSQIVILSSSPIYHPLLHACAGYLASYSSSHAKSACVLVDLCTGLFSPWISTVTAKVDLAIELMEDLLGIIQVSHQSITRVRIALKCILLGLSGQIDDVLAKYKEHKRKLLFLIEMLEPFLDPVIFSVNNTTPFGGASSISLVKQENNCFFALNIIREAVRRPTILPSLESEWTRGSVASSVILSILGPNMPLPSDIDLFKCSTAKVAESGISIPSNASISKLSTSSDVDGKIDGINNVVKFDVLEEAGLLFAPQDLKNTLFTNFADHCMGDIPGRCCEPTNGGNEDKKKTTWILMNHFQLDSSLFSDYFNLKLNYLKLTNLHECELRAAAFQQLALGLSSQCDITAEGYDAAVDAFILAAECFINPFFMISFTPNSKLSKHLKLVKSMINQSSSIMELKKDFLKTVAELEIISHLERKRDKIVLEILIQAAKVNRESRLGNSKSCSGDIEHSKQSINTLPHDTKDIDAVTLLRQNQNLLFEFVIQQLQREHHLSHEVLLQALLFLLQSATELLCPPEFIIDIILLSAESLSMLLMSQYNKLEKGITQFDLEKLHGLQRFWLLLERIVEASSGSDVKSGRASYGFQCYSLIPLSSWINKISKFSNASPIARFLGWMAVSRYAEQYHKERLFFASDLSQLTLLLTIFADELTFVDNSLQLKVEEEISFKQADTFAQLERESSHSYASDQDDSFHILYPSMHKFFPNMRRKFRTFGETILEAIGLQLKCLPSNSVPEILRWFSDLCMCPYVEAMKIRDLASLSSFDCLRGYTATNAKVIVLYILESLVTVHIESMLPEMARVAQILISLCKTSYCDVAFMESVLHLLKPFISFFLKKATLNEKLLADALPCEDFELNFYALFDSIKHKRELQNSSGVNRFQGSLMIFILGDLFLDLSLKRKIDILESLCLWTGFTSSELTSSFPNYLCAFKKIFDSCEMLLEGQLKCFDFIIPSKEQEVMVSLIDKTKLSHDFSGYGDQRHTTKPAKDFISSESFIDVPDREPYLFSIEEMKECSEVLERLILKLIPEIEKCWKLHSKFVNELTLKIARCFLFSRCLKFIGLSGSVISSSNDGTTPYASPRDLPYIWDNSLQGLAKTLVEFQENECWHTTSVILDYLLSLPQSISLDSCISNICSLIKQFCVCAPLISWRLQTDKWLTYLFMRGIGNTDVLKDSLVDLLGTMLSHGEPEQRAVALHHLGVMVGLDTYDRAAMLSLTFHSNLGGYEPATSLSESVISTLVSNTWDRVASLILSEPSIMLRSHAMALLSGYVPFVTRSQLQSFLVSSSNILQGFGRFSPLLEGHLTRLSLGLLASACLYSPSEDITLIPESIWKTLEQMGTSRTGWLDDVEKSVCLALCKLQTEFVDGKGALKEALIQASTTKSSDFDFKNIRESILQVLPCLTSARAYFEFFSKKADKESQELEEAEIEIELLQKEKAMQEVLGDSKNLLNHKDDNRLQQIKDDIRSLERSKLKEEVAERMLKKLAMRRTRKKVLDEIALQEMKLLEELDRDRKNEQEQELERQRQLELEHARTRELQFNLDMERERQSQRELQRELELVESGVRSSRREFSSNSSSRPREKFRERDAGRSGLEGSLRPGIKGQESCNAIQTSSCSLSLSSPTVVLSGSRPFSGQPPTILQSRERPAERGSTTYEDSLEGSRDSGDANSAGDPELSLAFDGPPRRGSKSRQVVERRDREARREGKWERKHA

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.100
SRP064423	SRR2545915	Juvenile tuber	23.770
SRP108465	SRR5643513	five period of Gastrodia elata	13.350
	SRR5643514	five period of Gastrodia elata	13.240
	SRR5643515	five period of Gastrodia elata	15.300
	SRR5643524	five period of Gastrodia elata	13.980
	SRR5643525	five period of Gastrodia elata	10.280
	SRR5643528	five period of Gastrodia elata	7.350
	SRR5643658	five period of Gastrodia elata	13.190
	SRR5643659	five period of Gastrodia elata	18.440
	SRR5643660	five period of Gastrodia elata	18.720
	SRR5643661	five period of Gastrodia elata	16.020
	SRR5643662	five period of Gastrodia elata	16.110
	SRR5643663	five period of Gastrodia elata	18.270
	SRR5643664	five period of Gastrodia elata	19.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.020
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.260
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.940
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.070
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.290
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.530
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.530
SRP279888	Gastro	Gastrodia elata tuber	20.57
	Juven	Juvenile tuber	24.96
	Mother_Gastro	Mother tuber of Gastrodia elata	16.57
	Mother_Juven	Mother tuber of Juvenile	24.54