Detail information of GWHGAAEX012780/evm.TU.scaffold_46.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743813946|ref|XP_010929875.1|5.25E-86PREDICTED: uncharacterized protein LOC105051239 [Elaeis guineensis]
trEMBLtr|A0A068V4K3|A0A068V4K3_COFCA2.00E-75Coffea canephora

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004215635421564890+
Transcript Sequence

Network for GWHGAAEX012780

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.840
SRR2545915Juvenile tuber18.780
SRP108465SRR5643513five period of Gastrodia elata26.370
SRR5643514five period of Gastrodia elata29.490
SRR5643515five period of Gastrodia elata27.780
SRR5643524five period of Gastrodia elata29.270
SRR5643525five period of Gastrodia elata35.130
SRR5643528five period of Gastrodia elata37.870
SRR5643658five period of Gastrodia elata41.110
SRR5643659five period of Gastrodia elata30.070
SRR5643660five period of Gastrodia elata26.780
SRR5643661five period of Gastrodia elata31.550
SRR5643662five period of Gastrodia elata31.880
SRR5643663five period of Gastrodia elata28.130
SRR5643664five period of Gastrodia elata31.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.370
SRR6049655Rhizomagastrodiae_C368-T10_good_122.610
SRR6049656Rhizomagastrodiae_C368-T07_good_128.590
SRR6049657Rhizomagastrodiae_C368-T07_good_126.380
SRR6049658Rhizomagastrodiae_C368-T04_good_122.760
SRR6049659Rhizomagastrodiae_C368-T04_good_123.680
SRR6049660Rhizomagastrodiae_C368-T01_good_122.320
SRR6049661Rhizomagastrodiae_C368-T04_good_122.390
SRR6049662Rhizomagastrodiae_C368-T01_good_121.140
SRR6049663Rhizomagastrodiae_C368-T01_good_119.820
SRR6049664Rhizomagastrodiae_C368-T10_good_131.430
SRR6049665Rhizomagastrodiae_C368-T10_good_131.430
SRP279888GastroGastrodia elata tuber 32.45
JuvenJuvenile tuber24.97
Mother_GastroMother tuber of Gastrodia elata 39.99
Mother_JuvenMother tuber of Juvenile 35.82