Detail information of GWHGAAEX012783/evm.TU.scaffold_46.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|212639583|ref|YP_002316103.1|1.00E-42ribosomal biogenesis GTPase [Anoxybacillus flavithermus WK1]
KOGKOG24851.00E-166Conserved ATP/GTP binding protein
nrgi|672126704|ref|XP_008786811.1|0PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9M8Z5|NSN1_ARATH1.00E-07Guanine nucleotide-binding protein-like NSN1 {ECO:0000305}
trEMBLtr|M0TWN9|M0TWN9_MUSAM2.00E-179Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P01820_001}
TAIRAT2G416701.00E-166P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004217926881812386-
Transcript Sequence

Network for GWHGAAEX012783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR11362412.50E-14
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.780
SRR2545915Juvenile tuber29.660
SRP108465SRR5643513five period of Gastrodia elata24.990
SRR5643514five period of Gastrodia elata29.880
SRR5643515five period of Gastrodia elata24.720
SRR5643524five period of Gastrodia elata25.070
SRR5643525five period of Gastrodia elata48.440
SRR5643528five period of Gastrodia elata34.030
SRR5643658five period of Gastrodia elata45.970
SRR5643659five period of Gastrodia elata24.390
SRR5643660five period of Gastrodia elata27.000
SRR5643661five period of Gastrodia elata22.650
SRR5643662five period of Gastrodia elata23.890
SRR5643663five period of Gastrodia elata23.850
SRR5643664five period of Gastrodia elata29.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.540
SRR6049655Rhizomagastrodiae_C368-T10_good_149.290
SRR6049656Rhizomagastrodiae_C368-T07_good_132.460
SRR6049657Rhizomagastrodiae_C368-T07_good_136.990
SRR6049658Rhizomagastrodiae_C368-T04_good_131.830
SRR6049659Rhizomagastrodiae_C368-T04_good_127.340
SRR6049660Rhizomagastrodiae_C368-T01_good_128.310
SRR6049661Rhizomagastrodiae_C368-T04_good_124.730
SRR6049662Rhizomagastrodiae_C368-T01_good_123.810
SRR6049663Rhizomagastrodiae_C368-T01_good_123.750
SRR6049664Rhizomagastrodiae_C368-T10_good_126.400
SRR6049665Rhizomagastrodiae_C368-T10_good_126.400
SRP279888GastroGastrodia elata tuber 24.97
JuvenJuvenile tuber30.34
Mother_GastroMother tuber of Gastrodia elata 21.88
Mother_JuvenMother tuber of Juvenile 17.34