Detail information of GWHGAAEX012793/evm.TU.scaffold_46.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37520286|ref|NP_923663.1|8.00E-41hypothetical protein glr0717 [Gloeobacter violaceus PCC 7421]
KOGKOG30856.00E-81Predicted hydrolase (HAD superfamily)
nrgi|743814775|ref|XP_010930151.1|8.21E-115PREDICTED: uncharacterized protein LOC105051407 isoform X1 [Elaeis guineensis]
trEMBLtr|M0RZJ9|M0RZJ9_MUSAM7.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P13410_001}
TAIRAT1G797906.00E-81Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004228070772842438-
Transcript Sequence

Network for GWHGAAEX012793

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13419.5HAD_21162122.50E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20860FHY1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Riboflavin metabolismmap00740

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.070
SRR2545915Juvenile tuber38.500
SRP108465SRR5643513five period of Gastrodia elata29.220
SRR5643514five period of Gastrodia elata31.620
SRR5643515five period of Gastrodia elata28.010
SRR5643524five period of Gastrodia elata29.530
SRR5643525five period of Gastrodia elata21.050
SRR5643528five period of Gastrodia elata24.220
SRR5643658five period of Gastrodia elata30.220
SRR5643659five period of Gastrodia elata16.990
SRR5643660five period of Gastrodia elata14.260
SRR5643661five period of Gastrodia elata17.750
SRR5643662five period of Gastrodia elata11.650
SRR5643663five period of Gastrodia elata11.780
SRR5643664five period of Gastrodia elata11.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.040
SRR6049655Rhizomagastrodiae_C368-T10_good_152.160
SRR6049656Rhizomagastrodiae_C368-T07_good_135.010
SRR6049657Rhizomagastrodiae_C368-T07_good_130.350
SRR6049658Rhizomagastrodiae_C368-T04_good_131.410
SRR6049659Rhizomagastrodiae_C368-T04_good_129.990
SRR6049660Rhizomagastrodiae_C368-T01_good_129.150
SRR6049661Rhizomagastrodiae_C368-T04_good_130.590
SRR6049662Rhizomagastrodiae_C368-T01_good_128.430
SRR6049663Rhizomagastrodiae_C368-T01_good_126.610
SRR6049664Rhizomagastrodiae_C368-T10_good_141.940
SRR6049665Rhizomagastrodiae_C368-T10_good_141.940
SRP279888GastroGastrodia elata tuber 16.64
JuvenJuvenile tuber21.52
Mother_GastroMother tuber of Gastrodia elata 19.11
Mother_JuvenMother tuber of Juvenile 14.18