Detail information of GWHGAAEX012802/evm.TU.scaffold_46.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392403499|ref|YP_006440111.1|2.00E-59metallo-beta-lactamase [Turneriella parva DSM 21527]
nrgi|743769641|ref|XP_010915115.1|3.64E-167PREDICTED: nuclear ribonuclease Z-like isoform X1 [Elaeis guineensis]
Swissprottr|Q8LGU7|RNZN_ARATH3.00E-150Nuclear ribonuclease Z
trEMBLtr|M0TD33|M0TD33_MUSAM2.00E-158Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P35900_001}
TAIRAT1G747004.00E-145tRNAse Z1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004237920703804779-
Transcript Sequence

Network for GWHGAAEX012802

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12706.6Lactamase_B_2442452.70E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00784rnz RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.020
SRR2545915Juvenile tuber17.640
SRP108465SRR5643513five period of Gastrodia elata14.040
SRR5643514five period of Gastrodia elata16.940
SRR5643515five period of Gastrodia elata13.290
SRR5643524five period of Gastrodia elata15.340
SRR5643525five period of Gastrodia elata10.640
SRR5643528five period of Gastrodia elata9.790
SRR5643658five period of Gastrodia elata10.620
SRR5643659five period of Gastrodia elata21.350
SRR5643660five period of Gastrodia elata22.540
SRR5643661five period of Gastrodia elata20.180
SRR5643662five period of Gastrodia elata18.850
SRR5643663five period of Gastrodia elata18.880
SRR5643664five period of Gastrodia elata16.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.850
SRR6049655Rhizomagastrodiae_C368-T10_good_112.420
SRR6049656Rhizomagastrodiae_C368-T07_good_117.450
SRR6049657Rhizomagastrodiae_C368-T07_good_118.730
SRR6049658Rhizomagastrodiae_C368-T04_good_119.680
SRR6049659Rhizomagastrodiae_C368-T04_good_116.770
SRR6049660Rhizomagastrodiae_C368-T01_good_115.090
SRR6049661Rhizomagastrodiae_C368-T04_good_115.830
SRR6049662Rhizomagastrodiae_C368-T01_good_117.670
SRR6049663Rhizomagastrodiae_C368-T01_good_116.670
SRR6049664Rhizomagastrodiae_C368-T10_good_115.940
SRR6049665Rhizomagastrodiae_C368-T10_good_115.940
SRP279888GastroGastrodia elata tuber 44.32
JuvenJuvenile tuber43.83
Mother_GastroMother tuber of Gastrodia elata 20.26
Mother_JuvenMother tuber of Juvenile 36.76