Detail information of GWHGAAEX012804/evm.TU.scaffold_46.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720062969|ref|XP_010275577.1|1.05E-38PREDICTED: ocs element-binding factor 1-like [Nelumbo nucifera]
Swissprottr|P24068|OCS1_MAIZE5.00E-21Ocs element-binding factor 1
trEMBLtr|M0ZWC7|M0ZWC7_SOLTU2.00E-36Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400009493}
TAIRAT1G753908.00E-27basic leucine-zipper 44

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004240281744029404+
Transcript Sequence

Network for GWHGAAEX012804

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_1751211.20E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.110
SRR2545915Juvenile tuber5.300
SRP108465SRR5643513five period of Gastrodia elata6.460
SRR5643514five period of Gastrodia elata16.770
SRR5643515five period of Gastrodia elata4.790
SRR5643524five period of Gastrodia elata6.030
SRR5643525five period of Gastrodia elata10.440
SRR5643528five period of Gastrodia elata7.500
SRR5643658five period of Gastrodia elata8.240
SRR5643659five period of Gastrodia elata7.600
SRR5643660five period of Gastrodia elata5.500
SRR5643661five period of Gastrodia elata8.870
SRR5643662five period of Gastrodia elata6.190
SRR5643663five period of Gastrodia elata10.030
SRR5643664five period of Gastrodia elata4.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.370
SRR6049655Rhizomagastrodiae_C368-T10_good_110.740
SRR6049656Rhizomagastrodiae_C368-T07_good_17.980
SRR6049657Rhizomagastrodiae_C368-T07_good_15.780
SRR6049658Rhizomagastrodiae_C368-T04_good_14.710
SRR6049659Rhizomagastrodiae_C368-T04_good_13.610
SRR6049660Rhizomagastrodiae_C368-T01_good_15.390
SRR6049661Rhizomagastrodiae_C368-T04_good_12.590
SRR6049662Rhizomagastrodiae_C368-T01_good_112.010
SRR6049663Rhizomagastrodiae_C368-T01_good_111.230
SRR6049664Rhizomagastrodiae_C368-T10_good_110.100
SRR6049665Rhizomagastrodiae_C368-T10_good_110.100
SRP279888GastroGastrodia elata tuber 3.27
JuvenJuvenile tuber6.05
Mother_GastroMother tuber of Gastrodia elata 2.60
Mother_JuvenMother tuber of Juvenile 0.83