Detail information of GWHGAAEX012812/evm.TU.scaffold_47.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743885830|ref|XP_010910009.1|5.84E-86PREDICTED: uncharacterized protein LOC105035983 isoform X3 [Elaeis guineensis]
trEMBLtr|M0U7F0|M0U7F0_MUSAM5.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP08390_001}
TAIRAT1G117601.00E-29Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000473362658169-
Transcript Sequence

Network for GWHGAAEX012812

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11778DHDDS, RER2, SRT1 Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.180
SRR2545915Juvenile tuber25.780
SRP108465SRR5643513five period of Gastrodia elata15.090
SRR5643514five period of Gastrodia elata31.360
SRR5643515five period of Gastrodia elata17.260
SRR5643524five period of Gastrodia elata32.990
SRR5643525five period of Gastrodia elata17.140
SRR5643528five period of Gastrodia elata12.750
SRR5643658five period of Gastrodia elata10.910
SRR5643659five period of Gastrodia elata9.640
SRR5643660five period of Gastrodia elata12.590
SRR5643661five period of Gastrodia elata10.200
SRR5643662five period of Gastrodia elata10.210
SRR5643663five period of Gastrodia elata14.680
SRR5643664five period of Gastrodia elata11.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.140
SRR6049655Rhizomagastrodiae_C368-T10_good_120.460
SRR6049656Rhizomagastrodiae_C368-T07_good_113.140
SRR6049657Rhizomagastrodiae_C368-T07_good_18.650
SRR6049658Rhizomagastrodiae_C368-T04_good_110.290
SRR6049659Rhizomagastrodiae_C368-T04_good_111.380
SRR6049660Rhizomagastrodiae_C368-T01_good_19.070
SRR6049661Rhizomagastrodiae_C368-T04_good_111.960
SRR6049662Rhizomagastrodiae_C368-T01_good_121.580
SRR6049663Rhizomagastrodiae_C368-T01_good_113.720
SRR6049664Rhizomagastrodiae_C368-T10_good_117.150
SRR6049665Rhizomagastrodiae_C368-T10_good_117.150
SRP279888GastroGastrodia elata tuber 12.58
JuvenJuvenile tuber10.62
Mother_GastroMother tuber of Gastrodia elata 17.40
Mother_JuvenMother tuber of Juvenile 13.03