Detail information of GWHGAAEX012817/evm.TU.scaffold_47.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33009.00E-84NADH:ubiquinone oxidoreductase, B16.6 subunit/cell death-regulatory protein
nrgi|747087662|ref|XP_011091382.1|7.51E-87PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sesamum indicum]
Swissprottr|O49313|NDADB_ARATH3.00E-84NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B
trEMBLtr|A0A059B2L2|A0A059B2L2_EUCGR7.00E-86Uncharacterized protein {ECO:0000313|EMBL:KCW60141.1}
TAIRAT2G332209.00E-84GRIM-19 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000047233168247267+
Transcript Sequence

Network for GWHGAAEX012817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06212.11GRIM-19201371.20E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11353NDUFA13 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.400
SRR2545915Juvenile tuber79.030
SRP108465SRR5643513five period of Gastrodia elata200.540
SRR5643514five period of Gastrodia elata219.080
SRR5643515five period of Gastrodia elata204.620
SRR5643524five period of Gastrodia elata205.770
SRR5643525five period of Gastrodia elata371.840
SRR5643528five period of Gastrodia elata356.410
SRR5643658five period of Gastrodia elata368.120
SRR5643659five period of Gastrodia elata181.580
SRR5643660five period of Gastrodia elata215.280
SRR5643661five period of Gastrodia elata241.030
SRR5643662five period of Gastrodia elata199.480
SRR5643663five period of Gastrodia elata204.940
SRR5643664five period of Gastrodia elata200.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1200.960
SRR6049655Rhizomagastrodiae_C368-T10_good_1372.620
SRR6049656Rhizomagastrodiae_C368-T07_good_1225.900
SRR6049657Rhizomagastrodiae_C368-T07_good_1187.370
SRR6049658Rhizomagastrodiae_C368-T04_good_1226.470
SRR6049659Rhizomagastrodiae_C368-T04_good_1241.600
SRR6049660Rhizomagastrodiae_C368-T01_good_1223.070
SRR6049661Rhizomagastrodiae_C368-T04_good_1262.850
SRR6049662Rhizomagastrodiae_C368-T01_good_1283.130
SRR6049663Rhizomagastrodiae_C368-T01_good_1265.770
SRR6049664Rhizomagastrodiae_C368-T10_good_1252.890
SRR6049665Rhizomagastrodiae_C368-T10_good_1252.890
SRP279888GastroGastrodia elata tuber 312.08
JuvenJuvenile tuber237.03
Mother_GastroMother tuber of Gastrodia elata 312.69
Mother_JuvenMother tuber of Juvenile 212.88