Detail information of GWHGAAEX012835/evm.TU.scaffold_47.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04394.00E-93VAMP-associated protein involved in inositol metabolism
nrgi|743854924|ref|XP_010941137.1|7.41E-112PREDICTED: vesicle-associated protein 1-2-like [Elaeis guineensis]
Swissprottr|Q8VZ95|VAP11_ARATH6.00E-94Vesicle-associated protein 1-1, N-terminally processed
trEMBLtr|A0A061DU98|A0A061DU98_THECC4.00E-107Plant VAP {ECO:0000313|EMBL:EOX96300.1}
TAIRAT2G451404.00E-93plant VAP homolog 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000047947146973419-
Transcript Sequence

Network for GWHGAAEX012835

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00635.25Motile_Sperm91093.80E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.190
SRR2545915Juvenile tuber53.760
SRP108465SRR5643513five period of Gastrodia elata50.180
SRR5643514five period of Gastrodia elata40.840
SRR5643515five period of Gastrodia elata48.360
SRR5643524five period of Gastrodia elata48.320
SRR5643525five period of Gastrodia elata65.510
SRR5643528five period of Gastrodia elata81.130
SRR5643658five period of Gastrodia elata66.610
SRR5643659five period of Gastrodia elata47.430
SRR5643660five period of Gastrodia elata49.740
SRR5643661five period of Gastrodia elata44.780
SRR5643662five period of Gastrodia elata51.080
SRR5643663five period of Gastrodia elata43.600
SRR5643664five period of Gastrodia elata39.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.920
SRR6049655Rhizomagastrodiae_C368-T10_good_140.250
SRR6049656Rhizomagastrodiae_C368-T07_good_146.900
SRR6049657Rhizomagastrodiae_C368-T07_good_144.690
SRR6049658Rhizomagastrodiae_C368-T04_good_149.830
SRR6049659Rhizomagastrodiae_C368-T04_good_145.060
SRR6049660Rhizomagastrodiae_C368-T01_good_142.320
SRR6049661Rhizomagastrodiae_C368-T04_good_148.580
SRR6049662Rhizomagastrodiae_C368-T01_good_146.400
SRR6049663Rhizomagastrodiae_C368-T01_good_145.840
SRR6049664Rhizomagastrodiae_C368-T10_good_150.450
SRR6049665Rhizomagastrodiae_C368-T10_good_150.450
SRP279888GastroGastrodia elata tuber 74.28
JuvenJuvenile tuber64.26
Mother_GastroMother tuber of Gastrodia elata 91.02
Mother_JuvenMother tuber of Juvenile 102.47