Detail information of GWHGAAEX012856/evm.TU.scaffold_47.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|4.00E-29serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|743830833|ref|XP_010934521.1|0PREDICTED: calcium-dependent protein kinase 28 isoform X2 [Elaeis guineensis]
Swissprottr|Q7XJR9|CDPKG_ARATH0Calcium-dependent protein kinase 16
trEMBLtr|B9S6N9|B9S6N9_RICCO0Calcium-dependent protein kinase, putative {ECO:0000313|EMBL:EEF40645.1}
TAIRAT2G178900calcium-dependent protein kinase 16

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004720903332129604-
Transcript Sequence

Network for GWHGAAEX012856

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase913518.10E-69
PF13499.5EF-hand_73984592.00E-07
PF13499.5EF-hand_74805321.20E-09
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005509Molecular Functioncalcium ion binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.350
SRR2545915Juvenile tuber49.470
SRP108465SRR5643513five period of Gastrodia elata42.670
SRR5643514five period of Gastrodia elata33.570
SRR5643515five period of Gastrodia elata49.990
SRR5643524five period of Gastrodia elata43.000
SRR5643525five period of Gastrodia elata33.110
SRR5643528five period of Gastrodia elata33.000
SRR5643658five period of Gastrodia elata18.710
SRR5643659five period of Gastrodia elata36.340
SRR5643660five period of Gastrodia elata60.550
SRR5643661five period of Gastrodia elata53.990
SRR5643662five period of Gastrodia elata47.290
SRR5643663five period of Gastrodia elata40.430
SRR5643664five period of Gastrodia elata27.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.750
SRR6049655Rhizomagastrodiae_C368-T10_good_135.190
SRR6049656Rhizomagastrodiae_C368-T07_good_135.720
SRR6049657Rhizomagastrodiae_C368-T07_good_143.170
SRR6049658Rhizomagastrodiae_C368-T04_good_146.890
SRR6049659Rhizomagastrodiae_C368-T04_good_158.810
SRR6049660Rhizomagastrodiae_C368-T01_good_143.500
SRR6049661Rhizomagastrodiae_C368-T04_good_143.440
SRR6049662Rhizomagastrodiae_C368-T01_good_134.160
SRR6049663Rhizomagastrodiae_C368-T01_good_142.720
SRR6049664Rhizomagastrodiae_C368-T10_good_140.750
SRR6049665Rhizomagastrodiae_C368-T10_good_140.750
SRP279888GastroGastrodia elata tuber 28.19
JuvenJuvenile tuber45.23
Mother_GastroMother tuber of Gastrodia elata 46.12
Mother_JuvenMother tuber of Juvenile 78.18