Gene detail

Detail information of GWHGAAEX012866/evm.TU.scaffold_47.74

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|39934488\|ref\|NP_946764.1\|	5.00E-53	acyl dehydratase [Rhodopseudomonas palustris CGA009]
KOG	KOG1206	7.00E-127	Peroxisomal multifunctional beta-oxidation protein and related enzymes
nr	gi\|672116172\|ref\|XP_008781243.1\|	6.95E-179	PREDICTED: enoyl-CoA hydratase 2, peroxisomal [Phoenix dactylifera]
Swissprot	tr\|Q8VYI3\|ECH2_ARATH	9.00E-138	Enoyl-CoA hydratase 2, peroxisomal
trEMBL	tr\|I1QQX3\|I1QQX3_ORYGL	3.00E-165	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA09G0145200.1}
TAIR	AT1G76150	7.00E-127	enoyl-CoA hydratase 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000047	2633226	2679716	+

Transcript Sequence
>GWHTAAEX012866 GTTCATCGCTACCATCATTAAATTGTCTAAATATTCAAAGCATTACATAAATGTAATCCCGACAGTTCAATTATCGAAAACCATGCTCGGCTGTTGAAAACTACTTCAAACATATCATAGTCTCAATCTTGCAGATAGACATGGCGAAGGCAAGCTCTGCGACTCGCATCGATCCCGAGCTCATCGTCTCACACAAATTTCCCGATGTAACTTTCTCATACAATGAAAGAGATGCCGCGATCTATGCTCTAGGCGTTGGAGCTTGTGCAGGAAATGCGATTGACGAGAAGGAACTCAAGTACGTTTACCATCGGGATGGACAGCGATCTATTGAAGTTTTGCCTACTTTTTCTGCTTTGTTTCCATTTAAAAACCAGCATGGTTTCATTCTGTCAGATGTTCCAGGTTTGGAGTTTGACCACCGCCTACTATTGCATGCCCAGCAATTCATAGAAATCTACAAATCTTTTCCTTCAAGTTGCTTAGTAAAGAATAAAGTATCCGTCGCTGGCTTGCATGATAAAGGAAAAGCTGCTATTGTTGAAATCGAAACAACAAGTTATGTAGAAGAAACTGGTGAAGTTATGTGTATGAATAGAAGCACTTTATACTTGCGTGGCGCTGGAGGCTTCTCGAAATCATCAAAACCATATTCATATGCAAGTTATCCAGCATACCAAGTTTCTTCTTTTTCAATTCCCAAACATGAACCTTCTATGATATATGAGGATCAGACGCATCAGTCTCAGGCTTTGCTGTATAGGCTTTCTGGTGATTACAATCCTCTGCACTCTGATTCAACTGTTGCAAGTATTGCTGGGTATAACCGTCCGATACTTCACGGGCTCTGCACCCTTGGATTTGCAATCAGAGCCATCATCAGGTCAGTCTGCTATGGCGATCCTGAAGCCGTGAGGACCGTGTTCAGCCGCTTTCTCCTCCACGTGTATCCCGGAGAGTCCCTTGTCACAGAGATGTGGATTGAAGGCCCAAAGGTTGTATATCAAACAAAGGTGAAAGAGAGGAATAGGGCTGTGCTTTCAGGGTATGTAATGCTCAAACACATTCCTTCATCGCTGTAGGAAGCTGTATAAGCCTTCAAGGGCGACCTGTGGGGTCTCTCTCAACATCTTCTTCTTCAAGGGAGGTTTTGGATCATAGTGCACTTAAACTATTTTCTTATTTACAGTTTGTGAAAGTCATTCATAAACATTTAGCCCCGAATGGAAACCCTAACATCTCTTTATTAAAAAGGGGTGATTAGGGTCTTATTTGCTTCTTTCTTCTTTAAAAATAGTAATTTGTTCAGGGCAGACTTTGGCTAGTCCTCTTGAACAGAACTTCATCTTCTTTGCCTAGCTTTAGTTCAATGAGTTGAGGCTTGGTACTTATTGAAAGCTGAACTGCGAAGCTAAGAAGGGTTGCGCCTTCAACCTAAGAAGCATAAGCGAAGCGTACTTTCATGTTCAAATGATATTGCTGTGCAGTTCTATTTCGTTAGATAATTTGAGGTTAAAAAATCTCCAAGAGCGGAAGTGAATG

Network for GWHGAAEX012866

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01575.18	MaoC_dehydratas	187	297	2.80E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	67.050
SRP064423	SRR2545915	Juvenile tuber	62.580
SRP108465	SRR5643513	five period of Gastrodia elata	40.380
	SRR5643514	five period of Gastrodia elata	42.970
	SRR5643515	five period of Gastrodia elata	43.080
	SRR5643524	five period of Gastrodia elata	44.480
	SRR5643525	five period of Gastrodia elata	32.580
	SRR5643528	five period of Gastrodia elata	30.900
	SRR5643658	five period of Gastrodia elata	36.810
	SRR5643659	five period of Gastrodia elata	34.680
	SRR5643660	five period of Gastrodia elata	38.180
	SRR5643661	five period of Gastrodia elata	39.030
	SRR5643662	five period of Gastrodia elata	40.510
	SRR5643663	five period of Gastrodia elata	40.220
	SRR5643664	five period of Gastrodia elata	42.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	63.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	89.410
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	59.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	69.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	72.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	83.650
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	64.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	70.040
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	66.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	70.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	68.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	68.580
SRP279888	Gastro	Gastrodia elata tuber	53.25
	Juven	Juvenile tuber	52.92
	Mother_Gastro	Mother tuber of Gastrodia elata	56.73
	Mother_Juven	Mother tuber of Juvenile	38.34