Detail information of GWHGAAEX012868/CADD01027.3.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297527617|ref|YP_003669641.1|6.00E-06translation elongation factor EF-1 subunit alpha [Staphylothermus hellenicus DSM 12710]
KOGKOG00525.00E-15Translation elongation factor EF-1 alpha/Tu
nrgi|575840964|gb|AHH02377.1|2.99E-15elongation factor 1-alpha, partial [Aegiceras corniculatum]
Swissprottr|Q40034|EF1A2_HORVU1.00E-15Elongation factor 1-alpha
trEMBLtr|W5ESD5|W5ESD5_WHEAT7.00E-16Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_4DS_B00F5CCE5.1} (Fragment)
TAIRAT5G603905.00E-15GTP binding Elongation factor Tu family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004727327332734191-
Transcript Sequence

Network for GWHGAAEX012868

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03231EEF1A RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.870
SRR2545915Juvenile tuber0.980
SRP108465SRR5643513five period of Gastrodia elata1.250
SRR5643514five period of Gastrodia elata1.440
SRR5643515five period of Gastrodia elata1.060
SRR5643524five period of Gastrodia elata0.940
SRR5643525five period of Gastrodia elata2.080
SRR5643528five period of Gastrodia elata1.430
SRR5643658five period of Gastrodia elata3.230
SRR5643659five period of Gastrodia elata1.440
SRR5643660five period of Gastrodia elata1.820
SRR5643661five period of Gastrodia elata1.690
SRR5643662five period of Gastrodia elata2.320
SRR5643663five period of Gastrodia elata2.430
SRR5643664five period of Gastrodia elata2.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.320
SRR6049655Rhizomagastrodiae_C368-T10_good_11.800
SRR6049656Rhizomagastrodiae_C368-T07_good_11.170
SRR6049657Rhizomagastrodiae_C368-T07_good_12.400
SRR6049658Rhizomagastrodiae_C368-T04_good_12.090
SRR6049659Rhizomagastrodiae_C368-T04_good_12.080
SRR6049660Rhizomagastrodiae_C368-T01_good_11.120
SRR6049661Rhizomagastrodiae_C368-T04_good_11.270
SRR6049662Rhizomagastrodiae_C368-T01_good_11.450
SRR6049663Rhizomagastrodiae_C368-T01_good_10.980
SRR6049664Rhizomagastrodiae_C368-T10_good_10.880
SRR6049665Rhizomagastrodiae_C368-T10_good_10.880
SRP279888GastroGastrodia elata tuber 1.53
JuvenJuvenile tuber2.22
Mother_GastroMother tuber of Gastrodia elata 1.61
Mother_JuvenMother tuber of Juvenile 2.26