Detail information of GWHGAAEX012876/evm.TU.scaffold_47.87


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262197966|ref|YP_003269175.1|2.00E-145ATP-dependent protease La [Haliangium ochraceum DSM 14365]
KOGKOG20040Mitochondrial ATP-dependent protease PIM1/LON
nrgi|743832624|ref|XP_010935031.1|0PREDICTED: lon protease homolog 2, peroxisomal [Elaeis guineensis]
Swissprottr|B8BDV1|LONP2_ORYSI0Lon protease homolog 2, peroxisomal {ECO:0000255|HAMAP-Rule:MF_03121}
trEMBLtr|A0A022R2J5|A0A022R2J5_ERYGU0Lon protease homolog 2, peroxisomal {ECO:0000256|HAMAP-Rule:MF_03121}
TAIRAT5G470400lon protease 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004729166542959698-
Transcript Sequence

Network for GWHGAAEX012876

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02190.15LON_substr_bdg112585.60E-23
PF00004.28AAA4095463.80E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01338lon Cell cycle - Caulobacter map04112

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004176Molecular FunctionATP-dependent peptidase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.030
SRR2545915Juvenile tuber28.120
SRP108465SRR5643513five period of Gastrodia elata22.280
SRR5643514five period of Gastrodia elata21.290
SRR5643515five period of Gastrodia elata19.820
SRR5643524five period of Gastrodia elata23.280
SRR5643525five period of Gastrodia elata28.270
SRR5643528five period of Gastrodia elata23.760
SRR5643658five period of Gastrodia elata34.550
SRR5643659five period of Gastrodia elata23.180
SRR5643660five period of Gastrodia elata24.600
SRR5643661five period of Gastrodia elata21.600
SRR5643662five period of Gastrodia elata19.560
SRR5643663five period of Gastrodia elata23.200
SRR5643664five period of Gastrodia elata24.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.680
SRR6049655Rhizomagastrodiae_C368-T10_good_123.160
SRR6049656Rhizomagastrodiae_C368-T07_good_125.880
SRR6049657Rhizomagastrodiae_C368-T07_good_133.020
SRR6049658Rhizomagastrodiae_C368-T04_good_138.030
SRR6049659Rhizomagastrodiae_C368-T04_good_149.980
SRR6049660Rhizomagastrodiae_C368-T01_good_133.720
SRR6049661Rhizomagastrodiae_C368-T04_good_137.220
SRR6049662Rhizomagastrodiae_C368-T01_good_119.310
SRR6049663Rhizomagastrodiae_C368-T01_good_127.340
SRR6049664Rhizomagastrodiae_C368-T10_good_121.120
SRR6049665Rhizomagastrodiae_C368-T10_good_121.120
SRP279888GastroGastrodia elata tuber 27.86
JuvenJuvenile tuber32.47
Mother_GastroMother tuber of Gastrodia elata 25.13
Mother_JuvenMother tuber of Juvenile 42.67