Detail information of GWHGAAEX012877/evm.TU.scaffold_47.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|296269316|ref|YP_003651948.1|6.00E-25PASTA sensor domain-containing serine/threonine protein kinase [Thermobispora bispora DSM 43833]
KOGKOG11872.00E-133Serine/threonine protein kinase
nrgi|743832637|ref|XP_010935034.1|2.83E-175PREDICTED: probable receptor-like protein kinase At5g47070 [Elaeis guineensis]
Swissprottr|Q9LTC0|Y5707_ARATH6.00E-134Probable receptor-like protein kinase At5g47070
trEMBLtr|M0SQY1|M0SQY1_MUSAM6.00E-171Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P21680_001}
TAIRAT5G470702.00E-133Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004730263133046511-
Transcript Sequence

Network for GWHGAAEX012877

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr913683.50E-47
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.050
SRR2545915Juvenile tuber24.670
SRP108465SRR5643513five period of Gastrodia elata18.090
SRR5643514five period of Gastrodia elata22.920
SRR5643515five period of Gastrodia elata22.220
SRR5643524five period of Gastrodia elata20.250
SRR5643525five period of Gastrodia elata33.840
SRR5643528five period of Gastrodia elata41.860
SRR5643658five period of Gastrodia elata30.300
SRR5643659five period of Gastrodia elata14.950
SRR5643660five period of Gastrodia elata16.230
SRR5643661five period of Gastrodia elata17.350
SRR5643662five period of Gastrodia elata12.120
SRR5643663five period of Gastrodia elata14.190
SRR5643664five period of Gastrodia elata16.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.820
SRR6049655Rhizomagastrodiae_C368-T10_good_117.690
SRR6049656Rhizomagastrodiae_C368-T07_good_117.920
SRR6049657Rhizomagastrodiae_C368-T07_good_121.130
SRR6049658Rhizomagastrodiae_C368-T04_good_129.620
SRR6049659Rhizomagastrodiae_C368-T04_good_139.420
SRR6049660Rhizomagastrodiae_C368-T01_good_126.550
SRR6049661Rhizomagastrodiae_C368-T04_good_126.590
SRR6049662Rhizomagastrodiae_C368-T01_good_122.660
SRR6049663Rhizomagastrodiae_C368-T01_good_126.240
SRR6049664Rhizomagastrodiae_C368-T10_good_123.290
SRR6049665Rhizomagastrodiae_C368-T10_good_123.290
SRP279888GastroGastrodia elata tuber 17.73
JuvenJuvenile tuber16.33
Mother_GastroMother tuber of Gastrodia elata 47.69
Mother_JuvenMother tuber of Juvenile 31.91