Gene detail

Database	Orthologs	Annotation
KOG	KOG2558	Negative regulator of histones
nr	gi\|672166285\|ref\|XP_008803069.1\|	PREDICTED: light-mediated development protein DET1 isoform X5 [Phoenix dactylifera]
Swissprot	tr\|Q9ZNU6\|DET1_SOLLC	Light-mediated development protein DET1
trEMBL	tr\|I1HFG4\|I1HFG4_BRADI	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G13320.3}
TAIR	AT4G10180	light-mediated development protein 1 / deetiolated1 (DET1)

Scaffold	Start	End	Strand
GWHAAEX00000047	3251558	3293133	-

Transcript Sequence
>GWHTAAEX012885 ATGTTTAAGAGCTTTAACGTGGCCGCGAGGCTCTTCGAGCGCCAAATCTTTCAGCCTCGTCCCAGTGCCAGCGTTAATTCTGTTAGACAGTTTTATGAAAATTTTGTCCCAAGTTGTACCCTATATGACATTGATTGTCCAGATAATTCGTTCCGCAAGTTTACTGATGATGGAAAGTATTTGATAAGTTTCAGCAAAAACCACCAGGAACTGATAGTTTACAGACCTACATGGTTGTCCTTTTCATGCAAAGGCGATGATTGCGATTCTCATGCTCTGCCCCAGAGAGCAAAGAGGTTTGACAGCTTCTTCGCCCACCTGTACACTGTTTCACTTGCAACAAATAATGAGTTTATTTGCAAAGACTTTTTTCTCTATATGGAAACATTGGAATTTGGCTTATTTGCAACTTCAACGGCACAATCACTTGATGTGCCTCCTACTGAGGGTGCAGTCAGTGGAGTTCCATGTATAGAAAGGATAGTGTTACATCTAGTGAGGCTAGAAGATGGTGTTATATTGGATGAAAAAGTCTTCTGCAATGATTTTGTGAATTTGACTCACAGCATGGGTGTTTTTTTGCACGAGGATCTGCTGTGTATCATGTCCCTGCGTTACCAGGCAATACACATTGTACAGGTTAGGGATTCTGGAAACCTTGTAGACGTGAGGATGGTGGGCTCTTTTTGCCGTGAGGATGATGAATTATTTCTTGGGTCACATATTCAGGTTACAGAGGGACAAATTTTTCTTAGCGGTATAAAGCAGAGGTTGCTTTCATTTATATATCGCAAGCACTGGAGTGAGGAAACTGATCAAACATTGAGGATTCAACATCTGAAGAAGAAATTCTATTTTCATTTTCAAGATTACGTTGATCTAATCATGTGGAAGGTACAGTTTTTGGATCGTCAGCATCTCTTAATTAAGTTTGGTAGTGTAGATGGAGGGGTTTCGCTGGCCACTGACCAACATCCGTCATTTTTTACTGTATACAACATGGAAACAACTGAAATAGTATCTTTTTTCCAGAATTCCACGGAGGAGCTCTACTATTTATTTGAGCACTTTTGCGATTATTTTAACGCATCTTCAAGAACAACTTTGCACTCAAATTTCATCTCTTCTCACTCAAATAATATTCATGCTTTTGATCAGCTGTGTGTCCTAAAAAATAAAGCAAACAGCTTTTTACAGTTTGCAAAGAAGATGGTGACATTACTGCCTTACACATGTCAATCACAGAGCCCTTCTCCATACTTTGATCACTCATTATTTCGATATGACGAGAAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K10571	DET1	Ubiquitin mediated proteolysis	map04120

GO term	Ontology	Name

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.670
SRP064423	SRR2545915	Juvenile tuber	20.670
SRP108465	SRR5643513	five period of Gastrodia elata	9.680
	SRR5643514	five period of Gastrodia elata	9.150
	SRR5643515	five period of Gastrodia elata	9.080
	SRR5643524	five period of Gastrodia elata	10.560
	SRR5643525	five period of Gastrodia elata	17.900
	SRR5643528	five period of Gastrodia elata	14.400
	SRR5643658	five period of Gastrodia elata	15.570
	SRR5643659	five period of Gastrodia elata	11.330
	SRR5643660	five period of Gastrodia elata	11.410
	SRR5643661	five period of Gastrodia elata	8.420
	SRR5643662	five period of Gastrodia elata	9.960
	SRR5643663	five period of Gastrodia elata	10.740
	SRR5643664	five period of Gastrodia elata	8.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.300
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.630
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.350
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.080
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.740
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.690
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.770
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.380
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.870
SRP279888	Gastro	Gastrodia elata tuber	9.71
	Juven	Juvenile tuber	6.38
	Mother_Gastro	Mother tuber of Gastrodia elata	6.62
	Mother_Juven	Mother tuber of Juvenile	4.91