Detail information of GWHGAAEX012889/evm.TU.scaffold_47.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743778318|ref|XP_010919617.1|2.22E-133PREDICTED: cell number regulator 6-like [Elaeis guineensis]
Swissprottr|B6SGC5|CNR6_MAIZE9.00E-122Cell number regulator 6
trEMBLtr|A0A061G0F7|A0A061G0F7_THECC2.00E-125Cell number regulator 6 isoform 1 {ECO:0000313|EMBL:EOY22878.1}
TAIRAT2G450109.00E-108PLAC8 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004734276923441391+
Transcript Sequence

Network for GWHGAAEX012889

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04749.16PLAC8621886.50E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.480
SRR2545915Juvenile tuber23.800
SRP108465SRR5643513five period of Gastrodia elata47.290
SRR5643514five period of Gastrodia elata41.340
SRR5643515five period of Gastrodia elata51.160
SRR5643524five period of Gastrodia elata43.090
SRR5643525five period of Gastrodia elata56.820
SRR5643528five period of Gastrodia elata61.720
SRR5643658five period of Gastrodia elata47.870
SRR5643659five period of Gastrodia elata56.750
SRR5643660five period of Gastrodia elata48.130
SRR5643661five period of Gastrodia elata58.170
SRR5643662five period of Gastrodia elata56.150
SRR5643663five period of Gastrodia elata44.850
SRR5643664five period of Gastrodia elata39.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.790
SRR6049655Rhizomagastrodiae_C368-T10_good_140.890
SRR6049656Rhizomagastrodiae_C368-T07_good_138.370
SRR6049657Rhizomagastrodiae_C368-T07_good_128.930
SRR6049658Rhizomagastrodiae_C368-T04_good_136.900
SRR6049659Rhizomagastrodiae_C368-T04_good_130.040
SRR6049660Rhizomagastrodiae_C368-T01_good_133.520
SRR6049661Rhizomagastrodiae_C368-T04_good_131.860
SRR6049662Rhizomagastrodiae_C368-T01_good_137.870
SRR6049663Rhizomagastrodiae_C368-T01_good_138.170
SRR6049664Rhizomagastrodiae_C368-T10_good_145.150
SRR6049665Rhizomagastrodiae_C368-T10_good_145.150
SRP279888GastroGastrodia elata tuber 43.44
JuvenJuvenile tuber29.02
Mother_GastroMother tuber of Gastrodia elata 59.79
Mother_JuvenMother tuber of Juvenile 44.85