Detail information of GWHGAAEX012896/evm.TU.scaffold_47.119
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15675997|ref|NP_273124.1| | 5.00E-80 | molecular chaperone DnaJ [Neisseria meningitidis MC58] |
| KOG | KOG0715 | 9.00E-138 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|672177416|ref|XP_008808803.1| | 0 | PREDICTED: chaperone protein dnaJ 1, mitochondrial-like [Phoenix dactylifera] |
| Swissprot | tr|Q38813|DNAJ1_ARATH | 2.00E-88 | Chaperone protein dnaJ 1, mitochondrial (Precursor) |
| trEMBL | tr|D7T2W9|D7T2W9_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI24850.3} |
| TAIR | AT5G48030 | 9.00E-138 | gametophytic factor 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000047 | 4244956 | 4280724 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012896
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 88 | 150 | 2.90E-25 |
| PF01556.17 | DnaJ_C | 206 | 419 | 3.70E-34 |
| PF00684.18 | DnaJ_CXXCXGXG | 233 | 291 | 1.70E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009408 | Biological Process | response to heat |
| GO:0006457 | Biological Process | protein folding |
| GO:0051082 | Molecular Function | unfolded protein binding |
| GO:0031072 | Molecular Function | heat shock protein binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 26.320 |
| SRR2545915 | Juvenile tuber | 24.120 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 32.340 |
| SRR5643514 | five period of Gastrodia elata | 31.020 | |
| SRR5643515 | five period of Gastrodia elata | 29.790 | |
| SRR5643524 | five period of Gastrodia elata | 29.300 | |
| SRR5643525 | five period of Gastrodia elata | 28.890 | |
| SRR5643528 | five period of Gastrodia elata | 30.500 | |
| SRR5643658 | five period of Gastrodia elata | 25.010 | |
| SRR5643659 | five period of Gastrodia elata | 36.090 | |
| SRR5643660 | five period of Gastrodia elata | 36.210 | |
| SRR5643661 | five period of Gastrodia elata | 37.050 | |
| SRR5643662 | five period of Gastrodia elata | 29.890 | |
| SRR5643663 | five period of Gastrodia elata | 34.100 | |
| SRR5643664 | five period of Gastrodia elata | 28.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 26.750 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.890 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.490 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.820 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.970 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.890 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 36.690 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 44.360 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 44.360 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 34.64 |
| Juven | Juvenile tuber | 28.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.41 | |
| Mother_Juven | Mother tuber of Juvenile | 24.45 |