Detail information of GWHGAAEX012901/evm.TU.scaffold_47.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|289596082|ref|YP_003482778.1|2.00E-50ATPase AAA [Aciduliprofundum boonei T469]
KOGKOG07370AAA+-type ATPase
nrgi|115469952|ref|NP_001058575.1|0Os06g0714500 [Oryza sativa Japonica Group]
Swissprottr|Q9SEX2|KTNA1_ARATH8.00E-48Katanin p60 ATPase-containing subunit A1 {ECO:0000255|HAMAP-Rule:MF_03023}
trEMBLtr|A2YGY8|A2YGY8_ORYSI0Putative uncharacterized protein {ECO:0000313|EMBL:EAZ02349.1}
TAIRAT4G276800P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004747573264800042+
Transcript Sequence

Network for GWHGAAEX012901

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.28AAA1202492.60E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.530
SRR2545915Juvenile tuber23.630
SRP108465SRR5643513five period of Gastrodia elata23.090
SRR5643514five period of Gastrodia elata19.750
SRR5643515five period of Gastrodia elata23.870
SRR5643524five period of Gastrodia elata21.100
SRR5643525five period of Gastrodia elata30.490
SRR5643528five period of Gastrodia elata34.280
SRR5643658five period of Gastrodia elata24.520
SRR5643659five period of Gastrodia elata31.600
SRR5643660five period of Gastrodia elata31.940
SRR5643661five period of Gastrodia elata29.700
SRR5643662five period of Gastrodia elata31.180
SRR5643663five period of Gastrodia elata31.520
SRR5643664five period of Gastrodia elata32.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.670
SRR6049655Rhizomagastrodiae_C368-T10_good_124.280
SRR6049656Rhizomagastrodiae_C368-T07_good_122.970
SRR6049657Rhizomagastrodiae_C368-T07_good_123.360
SRR6049658Rhizomagastrodiae_C368-T04_good_127.900
SRR6049659Rhizomagastrodiae_C368-T04_good_132.430
SRR6049660Rhizomagastrodiae_C368-T01_good_125.450
SRR6049661Rhizomagastrodiae_C368-T04_good_126.510
SRR6049662Rhizomagastrodiae_C368-T01_good_123.570
SRR6049663Rhizomagastrodiae_C368-T01_good_127.610
SRR6049664Rhizomagastrodiae_C368-T10_good_124.430
SRR6049665Rhizomagastrodiae_C368-T10_good_124.430
SRP279888GastroGastrodia elata tuber 33.49
JuvenJuvenile tuber65.39
Mother_GastroMother tuber of Gastrodia elata 54.17
Mother_JuvenMother tuber of Juvenile 64.70