Detail information of GWHGAAEX012902/evm.TU.scaffold_47.135
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|167629303|ref|YP_001679802.1| | 2.00E-64 | hexokinase [Heliobacterium modesticaldum Ice1] |
| KOG | KOG1369 | 0 | Hexokinase |
| nr | gi|743756115|ref|XP_010915190.1| | 0 | PREDICTED: hexokinase-2-like [Elaeis guineensis] |
| Swissprot | tr|Q42525|HXK1_ARATH | 0 | Hexokinase-1 |
| trEMBL | tr|V4UJX0|V4UJX0_9ROSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESR64550.1} |
| TAIR | AT4G29130 | 0 | hexokinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000047 | 5220747 | 5234643 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012902
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00349.20 | Hexokinase_1 | 42 | 240 | 6.20E-63 |
| PF03727.15 | Hexokinase_2 | 247 | 485 | 2.30E-80 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0001678 | Biological Process | cellular glucose homeostasis |
| GO:0016773 | Molecular Function | phosphotransferase activity, alcohol group as acceptor |
| GO:0005536 | Molecular Function | glucose binding |
| GO:0004396 | Molecular Function | hexokinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 124.500 |
| SRR2545915 | Juvenile tuber | 61.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 84.400 |
| SRR5643514 | five period of Gastrodia elata | 124.810 | |
| SRR5643515 | five period of Gastrodia elata | 83.360 | |
| SRR5643524 | five period of Gastrodia elata | 100.380 | |
| SRR5643525 | five period of Gastrodia elata | 120.750 | |
| SRR5643528 | five period of Gastrodia elata | 160.100 | |
| SRR5643658 | five period of Gastrodia elata | 106.170 | |
| SRR5643659 | five period of Gastrodia elata | 63.830 | |
| SRR5643660 | five period of Gastrodia elata | 71.030 | |
| SRR5643661 | five period of Gastrodia elata | 70.500 | |
| SRR5643662 | five period of Gastrodia elata | 56.900 | |
| SRR5643663 | five period of Gastrodia elata | 59.000 | |
| SRR5643664 | five period of Gastrodia elata | 64.070 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 134.330 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 120.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 137.760 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 122.110 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 150.620 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 165.400 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 114.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 128.020 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 171.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 125.310 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 216.370 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 216.370 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 59.54 |
| Juven | Juvenile tuber | 38.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 104.73 | |
| Mother_Juven | Mother tuber of Juvenile | 56.57 |