Detail information of GWHGAAEX012923/evm.TU.scaffold_48.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13051.00E-140Amino acid transporter protein
nrgi|743818759|ref|XP_010931319.1|1.07E-174PREDICTED: sodium-coupled neutral amino acid transporter 5 [Elaeis guineensis]
trEMBLtr|Q5QMB0|Q5QMB0_ORYSJ7.00E-168cDNA clone:J033087L14, full insert sequence {ECO:0000313|EMBL:BAG95448.1}
TAIRAT3G562001.00E-140Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004912241201228914-
Transcript Sequence

Network for GWHGAAEX012923

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans334107.70E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.610
SRR2545915Juvenile tuber57.590
SRP108465SRR5643513five period of Gastrodia elata93.010
SRR5643514five period of Gastrodia elata109.220
SRR5643515five period of Gastrodia elata124.360
SRR5643524five period of Gastrodia elata87.000
SRR5643525five period of Gastrodia elata94.180
SRR5643528five period of Gastrodia elata358.460
SRR5643658five period of Gastrodia elata104.700
SRR5643659five period of Gastrodia elata57.160
SRR5643660five period of Gastrodia elata62.890
SRR5643661five period of Gastrodia elata58.420
SRR5643662five period of Gastrodia elata108.130
SRR5643663five period of Gastrodia elata75.580
SRR5643664five period of Gastrodia elata87.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_181.260
SRR6049655Rhizomagastrodiae_C368-T10_good_1115.640
SRR6049656Rhizomagastrodiae_C368-T07_good_171.280
SRR6049657Rhizomagastrodiae_C368-T07_good_192.860
SRR6049658Rhizomagastrodiae_C368-T04_good_185.830
SRR6049659Rhizomagastrodiae_C368-T04_good_191.140
SRR6049660Rhizomagastrodiae_C368-T01_good_182.860
SRR6049661Rhizomagastrodiae_C368-T04_good_172.320
SRR6049662Rhizomagastrodiae_C368-T01_good_184.620
SRR6049663Rhizomagastrodiae_C368-T01_good_195.250
SRR6049664Rhizomagastrodiae_C368-T10_good_190.470
SRR6049665Rhizomagastrodiae_C368-T10_good_190.470
SRP279888GastroGastrodia elata tuber 74.77
JuvenJuvenile tuber73.02
Mother_GastroMother tuber of Gastrodia elata 354.68
Mother_JuvenMother tuber of Juvenile 196.94