Detail information of GWHGAAEX012928/evm.TU.scaffold_48.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470179656|ref|YP_007565700.1|3.00E-15putative oxidoreductase [Ilumatobacter coccineus YM16-304]
KOGKOG01431.00E-73Iron/ascorbate family oxidoreductases
nrgi|743766694|ref|XP_010913592.1|3.97E-118PREDICTED: probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 [Elaeis guineensis]
Swissprottr|Q945B6|AOP1L_ARATH5.00E-66Probable 2-oxoglutarate-dependent dioxygenase AOP1.2
trEMBLtr|K4C7V7|K4C7V7_SOLLC6.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc06g066830.2.1}
TAIRAT1G528201.00E-732-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004914794981497966+
Transcript Sequence

Network for GWHGAAEX012928

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.5DIOX_N11911.30E-06
PF03171.192OG-FeII_Oxy1732628.90E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.890
SRR2545915Juvenile tuber20.270
SRP108465SRR5643513five period of Gastrodia elata18.420
SRR5643514five period of Gastrodia elata22.640
SRR5643515five period of Gastrodia elata20.830
SRR5643524five period of Gastrodia elata25.510
SRR5643525five period of Gastrodia elata29.360
SRR5643528five period of Gastrodia elata31.910
SRR5643658five period of Gastrodia elata33.200
SRR5643659five period of Gastrodia elata16.310
SRR5643660five period of Gastrodia elata8.360
SRR5643661five period of Gastrodia elata15.990
SRR5643662five period of Gastrodia elata20.600
SRR5643663five period of Gastrodia elata17.140
SRR5643664five period of Gastrodia elata18.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.240
SRR6049655Rhizomagastrodiae_C368-T10_good_125.770
SRR6049656Rhizomagastrodiae_C368-T07_good_121.090
SRR6049657Rhizomagastrodiae_C368-T07_good_121.390
SRR6049658Rhizomagastrodiae_C368-T04_good_129.530
SRR6049659Rhizomagastrodiae_C368-T04_good_125.720
SRR6049660Rhizomagastrodiae_C368-T01_good_126.630
SRR6049661Rhizomagastrodiae_C368-T04_good_124.270
SRR6049662Rhizomagastrodiae_C368-T01_good_125.360
SRR6049663Rhizomagastrodiae_C368-T01_good_124.560
SRR6049664Rhizomagastrodiae_C368-T10_good_122.740
SRR6049665Rhizomagastrodiae_C368-T10_good_122.740
SRP279888GastroGastrodia elata tuber 20.69
JuvenJuvenile tuber19.40
Mother_GastroMother tuber of Gastrodia elata 47.03
Mother_JuvenMother tuber of Juvenile 24.87