Detail information of GWHGAAEX012934/evm.TU.scaffold_48.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31422.00E-55Prenylated rab acceptor 1
nrgi|720003504|ref|XP_010257015.1|1.46E-55PREDICTED: PRA1 family protein B1-like [Nelumbo nucifera]
Swissprottr|O80915|PR1B4_ARATH5.00E-56PRA1 family protein B4
trEMBLtr|K4D1X8|K4D1X8_SOLLC7.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc10g076360.1.1}
TAIRAT2G383602.00E-55prenylated RAB acceptor 1.B4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004918892071890474+
Transcript Sequence

Network for GWHGAAEX012934

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03208.18PRA1441843.30E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.120
SRR2545915Juvenile tuber10.460
SRP108465SRR5643513five period of Gastrodia elata11.990
SRR5643514five period of Gastrodia elata7.410
SRR5643515five period of Gastrodia elata10.240
SRR5643524five period of Gastrodia elata7.260
SRR5643525five period of Gastrodia elata18.280
SRR5643528five period of Gastrodia elata12.990
SRR5643658five period of Gastrodia elata19.660
SRR5643659five period of Gastrodia elata18.550
SRR5643660five period of Gastrodia elata21.770
SRR5643661five period of Gastrodia elata19.300
SRR5643662five period of Gastrodia elata18.850
SRR5643663five period of Gastrodia elata21.950
SRR5643664five period of Gastrodia elata25.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.770
SRR6049655Rhizomagastrodiae_C368-T10_good_17.720
SRR6049656Rhizomagastrodiae_C368-T07_good_110.190
SRR6049657Rhizomagastrodiae_C368-T07_good_119.860
SRR6049658Rhizomagastrodiae_C368-T04_good_117.170
SRR6049659Rhizomagastrodiae_C368-T04_good_117.310
SRR6049660Rhizomagastrodiae_C368-T01_good_113.540
SRR6049661Rhizomagastrodiae_C368-T04_good_19.360
SRR6049662Rhizomagastrodiae_C368-T01_good_16.650
SRR6049663Rhizomagastrodiae_C368-T01_good_17.050
SRR6049664Rhizomagastrodiae_C368-T10_good_16.960
SRR6049665Rhizomagastrodiae_C368-T10_good_16.960
SRP279888GastroGastrodia elata tuber 26.40
JuvenJuvenile tuber52.87
Mother_GastroMother tuber of Gastrodia elata 14.46
Mother_JuvenMother tuber of Juvenile 45.01