Detail information of GWHGAAEX012950/evm.TU.scaffold_48.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|734420805|gb|KHN41001.1|5.79E-30Putative B3 domain-containing protein [Glycine soja]
Swissprottr|Q5KQI4|Y5814_ORYSJ5.00E-28B3 domain-containing protein Os05g0481400
trEMBLtr|K7KAD2|K7KAD2_SOYBN1.00E-30Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G40400.5}
TAIRAT3G19180_27.00E-24Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004923491112356234-
Transcript Sequence

Network for GWHGAAEX012950

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B32723.30E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.910
SRR2545915Juvenile tuber11.400
SRP108465SRR5643513five period of Gastrodia elata0.510
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.470
SRR5643524five period of Gastrodia elata0.400
SRR5643525five period of Gastrodia elata5.350
SRR5643528five period of Gastrodia elata3.150
SRR5643658five period of Gastrodia elata3.990
SRR5643659five period of Gastrodia elata3.610
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata1.350
SRR5643662five period of Gastrodia elata0.950
SRR5643663five period of Gastrodia elata1.030
SRR5643664five period of Gastrodia elata1.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_12.740
SRR6049657Rhizomagastrodiae_C368-T07_good_13.870
SRR6049658Rhizomagastrodiae_C368-T04_good_15.070
SRR6049659Rhizomagastrodiae_C368-T04_good_16.620
SRR6049660Rhizomagastrodiae_C368-T01_good_11.020
SRR6049661Rhizomagastrodiae_C368-T04_good_14.360
SRR6049662Rhizomagastrodiae_C368-T01_good_15.640
SRR6049663Rhizomagastrodiae_C368-T01_good_12.300
SRR6049664Rhizomagastrodiae_C368-T10_good_111.020
SRR6049665Rhizomagastrodiae_C368-T10_good_111.020
SRP279888GastroGastrodia elata tuber 23.57
JuvenJuvenile tuber1.78
Mother_GastroMother tuber of Gastrodia elata 31.07
Mother_JuvenMother tuber of Juvenile 7.72