Detail information of GWHGAAEX012957/evm.TU.scaffold_48.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743789098|ref|XP_010922834.1|7.96E-61PREDICTED: protein LURP-one-related 5-like [Elaeis guineensis]
Swissprottr|Q9LVZ8|LOR12_ARATH1.00E-21Protein LURP-one-related 12
trEMBLtr|A0A067JP87|A0A067JP87_JATCU2.00E-53Uncharacterized protein {ECO:0000313|EMBL:KDP21815.1}
TAIRAT3G158103.00E-21Protein of unknown function (DUF567)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004925552122557082+
Transcript Sequence

Network for GWHGAAEX012957

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04525.11LOR542372.60E-33
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.570
SRR2545915Juvenile tuber16.860
SRP108465SRR5643513five period of Gastrodia elata3.250
SRR5643514five period of Gastrodia elata2.370
SRR5643515five period of Gastrodia elata5.010
SRR5643524five period of Gastrodia elata2.300
SRR5643525five period of Gastrodia elata0.370
SRR5643528five period of Gastrodia elata0.380
SRR5643658five period of Gastrodia elata1.060
SRR5643659five period of Gastrodia elata101.520
SRR5643660five period of Gastrodia elata86.260
SRR5643661five period of Gastrodia elata67.690
SRR5643662five period of Gastrodia elata39.780
SRR5643663five period of Gastrodia elata72.620
SRR5643664five period of Gastrodia elata56.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.280
SRR6049655Rhizomagastrodiae_C368-T10_good_17.520
SRR6049656Rhizomagastrodiae_C368-T07_good_115.950
SRR6049657Rhizomagastrodiae_C368-T07_good_116.540
SRR6049658Rhizomagastrodiae_C368-T04_good_111.770
SRR6049659Rhizomagastrodiae_C368-T04_good_110.000
SRR6049660Rhizomagastrodiae_C368-T01_good_111.390
SRR6049661Rhizomagastrodiae_C368-T04_good_110.140
SRR6049662Rhizomagastrodiae_C368-T01_good_15.740
SRR6049663Rhizomagastrodiae_C368-T01_good_16.730
SRR6049664Rhizomagastrodiae_C368-T10_good_18.710
SRR6049665Rhizomagastrodiae_C368-T10_good_18.710
SRP279888GastroGastrodia elata tuber 36.91
JuvenJuvenile tuber42.04
Mother_GastroMother tuber of Gastrodia elata 17.10
Mother_JuvenMother tuber of Juvenile 21.77