Gene detail

Detail information of GWHGAAEX012961/evm.TU.scaffold_48.96

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743789140\|ref\|XP_010922848.1\|	0	PREDICTED: probable galacturonosyltransferase 7 isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q9ZVI7\|GAUT7_ARATH	6.00E-165	Probable galacturonosyltransferase 7
trEMBL	tr\|M0U9Z8\|M0U9Z8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP17390_001}
TAIR	AT2G38650	2.00E-166	galacturonosyltransferase 7

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000049	2785427	2807828	+

Transcript Sequence
>GWHTAAEX012961 CCGATTTAAGTCCTAAATGAAAACGATTTCCCCTCCTCTAGTCATTACCCCGTTTTCTTTTCCTCTCTTTCATCGTCCATCTTCATCGAATTGCTTTTTCCCCAATCACAATTGAGAGAGTGAGAGAAAAGCTTCGGCGGGCACCTGGATGAGCTCGCACGATGGAGCGATGATGGGGATTGGAGAGAGATTGTTCTCCTCTGGTTTGTCAAGATAGCGCAGAACCTATTTGAAGAGGTAGAAGGAGATGAAAGGCCGCGCAGCTGTGGCTGCGACGTCATTTTTTCCTGTGAAGCAGTGGAAATGGAAATGGTTCACCCTGACTGTCCTTCTGCTTGTTTTCTTCTCGGTGTCGGTTCACTTCCCCTTCCTGCTAGGGCTGCACAACGGCTTCCCTGTCGGCTACTTAAGTGATGCCAACTCGCCAATAGGGTTTCTTGAAATCTATGGCACGGATAATGATTCTATGAAGCAAAATTCATTGAAGGATGATTCAAATACAAAGCAATTCTCGAGTAATTTTGCATCACCTTTGGCTCAGTTCAGCGACAGAGTTATAGCACATCTTTCTAATTGTTCATATATTTATGAAACTGAGAATTCTTGCGAGCTTGAATTTGGAAGTTACTGTCTTTGGTCGAAAGAACATAAGGAGGCAATGAACGATGCTGCAGTAAAGAGGTTTAAAGATCAGCTTTTTGTAGCCAGAGCTTATTACCCAAGCATTGCTAAACTTCAGGGACAGGAGAATCTATCACATGAGATGAAACAAAACATTCAAGAACATGAACGCATCCTTAGTGAAGTTATTTCAGATGCAGATCTCCCAGCATTCTTTGAAAATAAAATTCAGAAGATGGAACAAGCAATTGCAAAAGCAAAAAGATGCACCATTGAGTGCAGCAATGTTGAGAGGAAATTCAGACAGATTCTCGACCTTACAGAGGATGAAACTCATTTCCACAGGAAGCAGAGTGCCTTCCTATATCATCTTGGCGTCCAGACCATGCCTAAAAGCCTTCATTGTTTATCCATGAGATTAACCTTGGAATATTTTAGAGATCCTTCTCCAATTATTGAGCTTCCTCTTGCTTCCATGTTAAAAGACCCAACAAGGTTCAAGCACTATGCTATATTTACTAGAGATGTACATGCAGTTTCTGTCACCATCAATTCAACCGTCATGAGTTCCAAGGACACTTCTGATATGGTTTTCTATCTGATAACCGATAGACAGAATTTCTATGCTATGAAACTTTGGTTCACCCGAAACTCATACAAGGAAGCAGTCATCCATGTCCTGAATATTGGAGATCTTAGCCTGAGTTCATCGAATAATCTTGGCTTGAATTTATTCTCTGCCTCAGAAGAATTCAGGATTTCTGTCGTCCGTGAACTTGATCGCAAAACAACCGAATATGTGTCTATGTTCGGCCACTCGCAGTTCTTCCTCCCCGAAATATTGAAGAATTTGAAAAAGGTCGTAGTTTTGGATGATGATGTGATAGTCCAGCAGGACTTAGCTTTCTTGTGGGATATTGATCTGGAGGGCAAGGCCAACGGTGCTGTTAATTTCTGTAAGATAAAACTTGGCCAGCTTGAAACGGTCTTAGGAAGAGATATACATAATGGGAGTTCATGCCTCTGGATTTCTGGGTTGAATATAATCGATCTGGAGAAGTGGAGAGAACATAATATCACAGGAGTATATCGAAAGCTATTACAAAGGTTCCATGATGGAAGCGAGGAAACATGGAGAGCTGCAGCGTTGCCCATGAGCCTGCTGGCATTCCAGGATCATGTGTTTTCTCTTGATGGCAGTTTGGTAGTATCTGGGCTTGGTCATGACTACAATGCCAGTGAAGATGCCATACAGAATGCTGTTGCTCTTCACTATAATGGAAACATGAAGCCTTGGCTTGATTTAGGCATTCCTGCTTACAAGAAGTACTGGAAGAAGTTCTTGATCCATGGTGACCAGTTTATGGATGAATGCAATGTGCGGCAGTAGCAATTTCTTTTCATGCATTTGTGCTACTGGCGGAGCTGCTGTTGTTTGGTGGCACGGGGATGAAATTGATTGTACAACAAAGGCAGTCGTCGAACGGTTAGTTAAATTATATTGAATTATTCATTTGTATTTTAGTTGGCACCTATAATTGGATTGGTGCCATCTTGTTTAAACTGTAGATCGATATATAAATATTATCATTTGTTAAATATATTTTGATCTCATTCTTTGTCAATTTCCCTTATAGGTTGAATGGAATGTTCATATTTGCTAGATGCTGTCTTTGCTTAAATTTTAAGCTCTCTTTTGGTTGCCAATCTTACAAATAATATAATACTGATGAAGCGCTGTTCTGACAATGGTTGTATTCTTGATTATCTGTTACTGATTTTAAAACAATTTAATCTGTACAGATGAC

Network for GWHGAAEX012961

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	260	560	1.90E-44

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13648	GAUT	Metabolic pathways	map01100
K13648	GAUT	Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.770
SRP064423	SRR2545915	Juvenile tuber	21.340
SRP108465	SRR5643513	five period of Gastrodia elata	13.360
	SRR5643514	five period of Gastrodia elata	13.840
	SRR5643515	five period of Gastrodia elata	12.840
	SRR5643524	five period of Gastrodia elata	12.790
	SRR5643525	five period of Gastrodia elata	24.230
	SRR5643528	five period of Gastrodia elata	33.390
	SRR5643658	five period of Gastrodia elata	29.800
	SRR5643659	five period of Gastrodia elata	16.170
	SRR5643660	five period of Gastrodia elata	14.780
	SRR5643661	five period of Gastrodia elata	15.210
	SRR5643662	five period of Gastrodia elata	12.930
	SRR5643663	five period of Gastrodia elata	16.660
	SRR5643664	five period of Gastrodia elata	12.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.070
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.810
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.980
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.280
SRP279888	Gastro	Gastrodia elata tuber	13.09
	Juven	Juvenile tuber	14.27
	Mother_Gastro	Mother tuber of Gastrodia elata	14.55
	Mother_Juven	Mother tuber of Juvenile	10.16