Detail information of GWHGAAEX012962/evm.TU.scaffold_48.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297565127|ref|YP_003684099.1|2.00E-705,10-methylenetetrahydrofolate reductase [Meiothermus silvanus DSM 9946]
KOGKOG056405,10-methylenetetrahydrofolate reductase
nrgi|743789148|ref|XP_010922851.1|0PREDICTED: methylenetetrahydrofolate reductase 1 [Elaeis guineensis]
Swissprottr|Q75HE6|MTHR_ORYSJ0Probable methylenetetrahydrofolate reductase
trEMBLtr|M0TJL5|M0TJL5_MUSAM0Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}
TAIRAT2G441600methylenetetrahydrofolate reductase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004928481892894801+
Transcript Sequence

Network for GWHGAAEX012962

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02219.16MTHFR63011.20E-122
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00297metF, MTHFR Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Carbon fixation pathways in prokaryotesmap00720
One carbon pool by folatemap00670

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006555Biological Processmethionine metabolic process
GO:0004489Molecular Functionmethylenetetrahydrofolate reductase (NAD(P)H) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms161.570
SRR2545915Juvenile tuber156.560
SRP108465SRR5643513five period of Gastrodia elata107.690
SRR5643514five period of Gastrodia elata108.070
SRR5643515five period of Gastrodia elata117.900
SRR5643524five period of Gastrodia elata116.420
SRR5643525five period of Gastrodia elata294.010
SRR5643528five period of Gastrodia elata375.980
SRR5643658five period of Gastrodia elata443.920
SRR5643659five period of Gastrodia elata122.780
SRR5643660five period of Gastrodia elata113.180
SRR5643661five period of Gastrodia elata120.310
SRR5643662five period of Gastrodia elata129.270
SRR5643663five period of Gastrodia elata135.710
SRR5643664five period of Gastrodia elata118.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_179.610
SRR6049655Rhizomagastrodiae_C368-T10_good_177.650
SRR6049656Rhizomagastrodiae_C368-T07_good_188.610
SRR6049657Rhizomagastrodiae_C368-T07_good_194.740
SRR6049658Rhizomagastrodiae_C368-T04_good_190.200
SRR6049659Rhizomagastrodiae_C368-T04_good_1100.610
SRR6049660Rhizomagastrodiae_C368-T01_good_198.720
SRR6049661Rhizomagastrodiae_C368-T04_good_188.970
SRR6049662Rhizomagastrodiae_C368-T01_good_195.460
SRR6049663Rhizomagastrodiae_C368-T01_good_197.640
SRR6049664Rhizomagastrodiae_C368-T10_good_178.220
SRR6049665Rhizomagastrodiae_C368-T10_good_178.220
SRP279888GastroGastrodia elata tuber 147.08
JuvenJuvenile tuber130.86
Mother_GastroMother tuber of Gastrodia elata 205.68
Mother_JuvenMother tuber of Juvenile 206.83