Detail information of GWHGAAEX012963/evm.TU.scaffold_48.101


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297527622|ref|YP_003669646.1|6.00E-2150S ribosomal protein L7Ae/L30e/S12e/Gadd45 [Staphylothermus hellenicus DSM 12710]
KOGKOG29887.00E-6660S ribosomal protein L30
nrgi|672126590|ref|XP_008786753.1|3.92E-73PREDICTED: 60S ribosomal protein L30-like [Phoenix dactylifera]
Swissprottr|O49884|RL30_LUPLU3.00E-7060S ribosomal protein L30
trEMBLtr|B3TLP4|B3TLP4_ELAGV3.00E-73Ribosomal protein L30 {ECO:0000313|EMBL:ACF06475.1}
TAIRAT1G362407.00E-66Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004928969782904902-
Transcript Sequence

Network for GWHGAAEX012963

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01248.25Ribosomal_L7Ae131052.20E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02908RP-L30e, RPL30 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms210.340
SRR2545915Juvenile tuber247.560
SRP108465SRR5643513five period of Gastrodia elata391.490
SRR5643514five period of Gastrodia elata520.600
SRR5643515five period of Gastrodia elata441.720
SRR5643524five period of Gastrodia elata493.760
SRR5643525five period of Gastrodia elata279.440
SRR5643528five period of Gastrodia elata351.630
SRR5643658five period of Gastrodia elata236.330
SRR5643659five period of Gastrodia elata435.570
SRR5643660five period of Gastrodia elata422.170
SRR5643661five period of Gastrodia elata468.690
SRR5643662five period of Gastrodia elata374.040
SRR5643663five period of Gastrodia elata378.660
SRR5643664five period of Gastrodia elata354.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1318.790
SRR6049655Rhizomagastrodiae_C368-T10_good_1469.850
SRR6049656Rhizomagastrodiae_C368-T07_good_1426.860
SRR6049657Rhizomagastrodiae_C368-T07_good_1272.980
SRR6049658Rhizomagastrodiae_C368-T04_good_1318.290
SRR6049659Rhizomagastrodiae_C368-T04_good_1260.490
SRR6049660Rhizomagastrodiae_C368-T01_good_1331.130
SRR6049661Rhizomagastrodiae_C368-T04_good_1308.690
SRR6049662Rhizomagastrodiae_C368-T01_good_1477.350
SRR6049663Rhizomagastrodiae_C368-T01_good_1441.420
SRR6049664Rhizomagastrodiae_C368-T10_good_1546.460
SRR6049665Rhizomagastrodiae_C368-T10_good_1546.460
SRP279888GastroGastrodia elata tuber 590.97
JuvenJuvenile tuber552.01
Mother_GastroMother tuber of Gastrodia elata 392.48
Mother_JuvenMother tuber of Juvenile 469.79