Detail information of GWHGAAEX012968/evm.TU.scaffold_48.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743859099|ref|XP_010942574.1|0PREDICTED: uncharacterized protein LOC105060521 isoform X5 [Elaeis guineensis]
trEMBLtr|M0SDX1|M0SDX1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P12040_001}
TAIRAT3G076608.00E-91Kinase-related protein of unknown function (DUF1296)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004930516563107930+
Transcript Sequence

Network for GWHGAAEX012968

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06972.10DUF12969682.20E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms109.330
SRR2545915Juvenile tuber194.270
SRP108465SRR5643513five period of Gastrodia elata46.310
SRR5643514five period of Gastrodia elata42.740
SRR5643515five period of Gastrodia elata41.780
SRR5643524five period of Gastrodia elata37.790
SRR5643525five period of Gastrodia elata32.020
SRR5643528five period of Gastrodia elata31.960
SRR5643658five period of Gastrodia elata33.310
SRR5643659five period of Gastrodia elata81.080
SRR5643660five period of Gastrodia elata85.280
SRR5643661five period of Gastrodia elata77.640
SRR5643662five period of Gastrodia elata83.450
SRR5643663five period of Gastrodia elata92.430
SRR5643664five period of Gastrodia elata105.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_182.530
SRR6049655Rhizomagastrodiae_C368-T10_good_171.530
SRR6049656Rhizomagastrodiae_C368-T07_good_174.390
SRR6049657Rhizomagastrodiae_C368-T07_good_195.320
SRR6049658Rhizomagastrodiae_C368-T04_good_1111.320
SRR6049659Rhizomagastrodiae_C368-T04_good_1131.760
SRR6049660Rhizomagastrodiae_C368-T01_good_197.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1101.910
SRR6049662Rhizomagastrodiae_C368-T01_good_156.710
SRR6049663Rhizomagastrodiae_C368-T01_good_181.890
SRR6049664Rhizomagastrodiae_C368-T10_good_147.910
SRR6049665Rhizomagastrodiae_C368-T10_good_147.910
SRP279888GastroGastrodia elata tuber 93.38
JuvenJuvenile tuber80.41
Mother_GastroMother tuber of Gastrodia elata 40.49
Mother_JuvenMother tuber of Juvenile 66.69