Detail information of GWHGAAEX012976/evm.TU.scaffold_48.115


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG45485.00E-101Mitochondrial ribosomal protein L17
nrgi|357124489|ref|XP_003563932.1|3.78E-116PREDICTED: 39S ribosomal protein L46, mitochondrial [Brachypodium distachyon]
trEMBLtr|I1GYW7|I1GYW7_BRADI1.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G43120.1}
TAIRAT1G146205.00E-101decoy

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004933511373371287+
Transcript Sequence

Network for GWHGAAEX012976

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.120
SRR2545915Juvenile tuber54.320
SRP108465SRR5643513five period of Gastrodia elata73.980
SRR5643514five period of Gastrodia elata95.970
SRR5643515five period of Gastrodia elata70.400
SRR5643524five period of Gastrodia elata86.290
SRR5643525five period of Gastrodia elata40.270
SRR5643528five period of Gastrodia elata42.590
SRR5643658five period of Gastrodia elata29.420
SRR5643659five period of Gastrodia elata70.100
SRR5643660five period of Gastrodia elata66.800
SRR5643661five period of Gastrodia elata76.840
SRR5643662five period of Gastrodia elata55.180
SRR5643663five period of Gastrodia elata60.570
SRR5643664five period of Gastrodia elata60.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.540
SRR6049655Rhizomagastrodiae_C368-T10_good_191.500
SRR6049656Rhizomagastrodiae_C368-T07_good_167.690
SRR6049657Rhizomagastrodiae_C368-T07_good_149.040
SRR6049658Rhizomagastrodiae_C368-T04_good_140.600
SRR6049659Rhizomagastrodiae_C368-T04_good_139.460
SRR6049660Rhizomagastrodiae_C368-T01_good_147.630
SRR6049661Rhizomagastrodiae_C368-T04_good_138.050
SRR6049662Rhizomagastrodiae_C368-T01_good_148.320
SRR6049663Rhizomagastrodiae_C368-T01_good_146.410
SRR6049664Rhizomagastrodiae_C368-T10_good_186.010
SRR6049665Rhizomagastrodiae_C368-T10_good_186.010
SRP279888GastroGastrodia elata tuber 74.47
JuvenJuvenile tuber48.00
Mother_GastroMother tuber of Gastrodia elata 22.75
Mother_JuvenMother tuber of Juvenile 26.30