Gene detail

Detail information of GWHGAAEX012977/evm.TU.scaffold_48.116

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4658	5.00E-118	Apoptotic ATPase
nr	gi\|514800895\|ref\|XP_004975365.1\|	0	PREDICTED: putative disease resistance protein RGA4-like isoform X1 [Setaria italica]
Swissprot	tr\|Q9LRR4\|R13L1_ARATH	1.00E-118	Putative disease resistance RPP13-like protein 1
trEMBL	tr\|B8AT12\|B8AT12_ORYSI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:EEC77145.1}
trEMBL	tr\|B8AT12\|B8AT12_ORYSI	5.00E-29	Putative uncharacterized protein {ECO:0000313\|EMBL:EEC77145.1}
TAIR	AT3G14470	5.00E-118	NB-ARC domain-containing disease resistance protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000049	3389409	3398285	-

Transcript Sequence
>GWHTAAEX012977 TGAACAACTTGTAAAAATTGATCCAAATTTAGAAGCTCCATTTTTTTTTCTTAGATCCAAAATCCTCGGTCCCGCTAACTCGCCTGCTTCATCTTACACAGTCTCTGCGGATAGCGAGGATAGAGAAGCACCATGGCATCACTACTTTTAGCCGATTGGATCGGATCTAAAGTTGTAGGCAAGTTAATCGACATTGGCTTCTCCTATCTGCAGGACCATTTTTTCTGGCAGACGGGAATGAAAAATGAGCTGGAAAGGCTTCAGGATCTCCACCCGAAGATCCAATCCCTTGTTGCGACTTCGAGCAGAGTGTTGATGAGCGGGCAGAGCCGGCCAGATCTTAATGAATGGCTAATGCAGCTCAGAGATGCCATCGACCAAGCCGATGACTTGCTCGATATGCTGGAGTACAACGAACTTGCAAAGAAAGTGCACAACGCTGGTCCAAACAAGGTGCGCAACACTATCTGCTCCCTGCATAACTGTTGTCTGAACCCCAACTTCAGCAGGCATAACTTTAATGAAGATCCTGCTGTGAATAAGCTACGAAAAGTTGTTAAAAGGCTTGATGAAGTCTTCGCAAGCGCCGGAAATTTCCTTCAGCTTGTTGAGAGCACAAGGCATGAAGCGAAGAAGCAGCAGGATGAGCTCTACAAGGTTCGTGAAACCGGCTCCTTGCCTAAAACGGATATGTTTGGGCGCAAAGGGGAGATGGATTTCATTATAGAATGGCTGAAGAGACCTCTGGATGATGATTATGATGATAATGGATGTTCAGTTACTAGTGGTGTAATGTATGACAACATATCTGTTCTTTCAGTAGTAGGACATGGAGGAATGGGGAAGACGACGCTAGTGCAGCATGTTTATAAAGATGAGGCGGCAGATGAATTTGATCTTAAATTGTGGGTTTGTGTTTCTAACAACTTTGATGTGAAAAGGCTTCTTGCAGATATGCTTGAATCTCTGACTGGACAGAGGCCTAATTTGGCCTCGCTCAATGCACTTCAAGAGAGTCTCAAAGCCGAATTAATGTTGAAAAGGTTTTTTCTTGTTCTGGATGATGTTTGGGACGAGGAGAAACAAGATAAGAGCAAGTGGGAGAATGTGCTTGCTCCTCTAGCCAATGGGAAGGAGGGGAGCAAAGTTTTGGTGACAACTAGAATGGACTCTGTTGCGTTGCTTGTCACAAGAGTGTTGAAAAAAAAGGTGGTAAAATTGAAATTGGAAGGTTTGAAAGAAGAAGATTGCTTGCTTCTCTTCAACAGTTATGCCTTTACTGATATGAAGAATATTAAAGGTCATTATGAACTAAAATCGATTGGAAGAATGATAGTTAAAAAGCTTTCAGGATCTCCACTAGCAGCTAAAGTAATTGGGGGGCTATTAAACTCTAATTTGGATGTAAGGCACTGGAATAATGTGCTGAGCAGTGACATTGGAAATGCAGAACAGGGTCATAATGATATTATGCCAATTCTTAGGCTTAGCTACACGTATCTTCCACCGCATTTGCAGAATTGCTTTGCATTTTGTTCCATATTTCCTCGAGATCACGAGTTTGATAAAGATGATTTGGTCCGCATGTGGATGGCCTTGGGATTCATTGAGCAGCCTCATTTTGTAGGGGACTCATTGGAGGATGTTGGTGGTAAATATTTTGACGCTTTGGTTAAAAAATCCATCTTTGAGAAAGTTGAGGATTATCATCGAAACATTACATATTATCTAATGCATGATCTGCTACATGAGCTCGCTCAAACAGTGTCTGCTCAGGTATGCATTAGAGTTGTCTGTGATGATAATTTTCCTATTAAACTTCCTGACAGCATCCGCCACTTATCTGTTGTAACCAGTAAGCTTGCAGTTCTCGAAGAAATGAGAAGTTTTAAGAACCTGCGTTCTCTTTTTTTGTCATATCGTGGGGAGAACACATTTTTAGAAAATACTTATCATGGAAATGATCAGAAGTTTGATCTTGTGCTCTCCCAAATAATTAAAGCATCAAAAAACATCCGCTTGCTGTGCGTACATGCACCACACTTCAAAAAGATGCCTAAAGAAATTGGTGATTTGATACACCTTCGATTCATGAAGCTAGTTCAAACTAGTATCACTAGATTGCCTAAATCAGTTTGCAATCTCTATCACCTTCAAGTTATGGTTTATGAAGAGATGTATCGGGTCTCTCGTAATTTCTTACCAAAGGGTATGAACAGTCTACCTAATCTTAGACATCTGATATTGCCATGGGATGAAATTGATGGAATGCCTGAGATTGGGAAACTGTCATTCCTCCAAGGAATAGATGGTTTTCGCATAATGGATGCAAACGGATATAGAATCGAGGAGCTGCAGCATTTGAATGAGCTTCGAAGTCTACGCATTAAACTTATTGAAAATGTGAAGGACCCTGTAGAGGCCAGGAATGTGAAGTTAAATGAAAAGCAGCACCTCATAGATCTCTCTATAGAATGGGGGGATGGTAAGAAATGTTGTGAGGATGGTGACGAATATTGGGATGCTGAACATATCAGAAATGACTCTAATCATGAGTTAGATGAACATGTACTTGACCAACTCCAGCCTCACACCAACTTAAAGAAACTGACAGTACATGGCTATATTGGTTCCAGATCTTCGGTTTGGATGATTCCTTCATTTCTTGGAAATTTGGAGAACATAAGATTACACAAATGTGTAGGATGGGAAAAACTTCCTTCTTTGGGGCAGCTGCCCTTTCTAAAAATTTTAGACCTTTCTGATATGCCACTGGTGAGACGACTTGGCTATGAATTTCATGGACTAGGAGAGAACTGTGGTTTTCAGTCATTGGAGATATTGCTTATTAGGAAACTTGAAGCGCTGGAGGAATGGTCTGATAGTGCTGCAATTGAACTCCATCAATGGTTTCCTAGCCTTAGAAAGCTGCACGTTCAACAGTGTCCCAAGTTGCATGAATTTCCCTCATTACCTCTCAATCTTACAAGATTAAAGGTAGCTGATGTGGGATTGACTGCATTTCCTGGGCATAAACATAATTACAGAAACAACTCATTTACTTTTTCTTCCCTTGCTGAAATAGAAATCATTGGCTGCAAAGACATCCCAGCCCTTCCTTCTGAAGAAGTACTTGGAAGGTTTACAGCACTTGAACATTTGGAAATAAGCTACTGTGAAAATCTGAGGTCACTTGGTGGCTTAATGGCAGTTCATTCCCTTAAAAGAGTCGCAATCTGGGATTGCCCGAATCTCATCCAAAGAGCATCATGGCCATCCACTGAAAAAAATGAGACCTTTGGAAGTATCCCATTCTTTCTTGAGCAACTAGAAACAAATGATCCCTTATTATTGCTAGAAACGCCATTGAGAAACCTTAGCTCCGTTCAGATTCTTAAAATTATGTTTAATAAAAACTTAAATTCTTTTCCAGTTGAGGCAGAGAATTGGCTGTTGCGAAACTGTTCATCTCTCCGTGAGTTGCACTTATGGGATGTTATATCTCTACAATCCCTTCCTTCCTGTTTGCATGAGCTTTCTTCCCTCTTGGTTTTAGATGTATTTCACACTCCTGACCTGAAACAACTGCCAGAACTCCCTTCCTCGTTGCAAAAATTGATGATAACTTATTGTCATCCAGAATTAAAGGAGCGATACCAGAGTGATGCTGGCACTGATTGGCAGAAGATTGCTTATGTTCCTCATGTTAGCATATGCATTTAATGGCTAATGTGTTCCAGCCATATCTGCAATTATCTCAGTTGAATGTGAACATAAATTTGCATCCTTCAAGATTTCTCGTAACCTGACCTGCTTAAATTAAGTGAGAGGAGGGAAAAGGTTTTCCACCGATAAACGGGCGAAAGATTCTGAACTGTATTCAGCTGACTTCATGGAAAAAGCCAATTATTGGTAGAAGATGCATGGGAGCGAAGTGTGTTAAGATTATTAATGAAATGGGATCATAGCTGACCTTGATCCATAACGTTCGACTCTGTTTTAAGCCAGGAATTTTAATTTAACAGGAGATCGTAGCTTTTTAAAAGAACTGAGAAGAGATGAAAGAAGAGAGAGAAACCTTATGAGAAAGATGATCTAGCTATCTTTTTCTTCTTCCAGTAATCCAGAGCATCTTTTTTAAGCCCTCAAGATAATCCAAATAATGTGATCAACTGTTTAAATAGTGATATTCTGACGGAAGCAACAGTATATTTTGATCAGCCCATTCACATCATTGTATACCGATTGTGGAGCTGTGAAGTCAGCTGAATGACTCAGAGTTTGAGCTGTTTCGATTTGAAGCCTCGTCGAGCTGAAATGAAGGGCTTCACCTTAGAAGATGCATCTTACAGAATTTTTCTTTACACAAAGTAGCTGTTGAGCGGGTTTACTTGTTCACACTTAATTGCTGCCCAGTATTCTAACATTATTGGAAGTCGCTGGTCTGCTCGCCTTACCGGAGTCTGGAATTATTATTCTCGTGGCCTTTTTCTTCGAAAGTGTTTATTTTTTAGTAAGGGGAGTACCATGGTTTCCTTTATATGCATAGATGTAGACGTGAATCATATGGCTGGAAAATGTCTTTGTTTTATTTTCTCTGATTATTCTCAATTGGACTTGGTTTCTATCAATTTACTACAGTTTTTGGGGCTTT

Network for GWHGAAEX012977

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00931.21	NB-ARC	222	494	3.50E-56

Protein Sequence

>GWHPAAEX012977
MASLLLADWIGSKVVGKLIDIGFSYLQDHFFWQTGMKNELERLQDLHPKIQSLVATSSRVLMSGQSRPDLNEWLMQLRDAIDQADDLLDMLEYNELAKKVHNAGPNKVRNTICSLHNCCLNPNFSRHNFNEDPAVNKLRKVVKRLDEVFASAGNFLQLVESTRHEAKKQQDELYKVRETGSLPKTDMFGRKGEMDFIIEWLKRPLDDDYDDNGCSVTSGVMYDNISVLSVVGHGGMGKTTLVQHVYKDEAADEFDLKLWVCVSNNFDVKRLLADMLESLTGQRPNLASLNALQESLKAELMLKRFFLVLDDVWDEEKQDKSKWENVLAPLANGKEGSKVLVTTRMDSVALLVTRVLKKKVVKLKLEGLKEEDCLLLFNSYAFTDMKNIKGHYELKSIGRMIVKKLSGSPLAAKVIGGLLNSNLDVRHWNNVLSSDIGNAEQGHNDIMPILRLSYTYLPPHLQNCFAFCSIFPRDHEFDKDDLVRMWMALGFIEQPHFVGDSLEDVGGKYFDALVKKSIFEKVEDYHRNITYYLMHDLLHELAQTVSAQVCIRVVCDDNFPIKLPDSIRHLSVVTSKLAVLEEMRSFKNLRSLFLSYRGENTFLENTYHGNDQKFDLVLSQIIKASKNIRLLCVHAPHFKKMPKEIGDLIHLRFMKLVQTSITRLPKSVCNLYHLQVMVYEEMYRVSRNFLPKGMNSLPNLRHLILPWDEIDGMPEIGKLSFLQGIDGFRIMDANGYRIEELQHLNELRSLRIKLIENVKDPVEARNVKLNEKQHLIDLSIEWGDGKKCCEDGDEYWDAEHIRNDSNHELDEHVLDQLQPHTNLKKLTVHGYIGSRSSVWMIPSFLGNLENIRLHKCVGWEKLPSLGQLPFLKILDLSDMPLVRRLGYEFHGLGENCGFQSLEILLIRKLEALEEWSDSAAIELHQWFPSLRKLHVQQCPKLHEFPSLPLNLTRLKVADVGLTAFPGHKHNYRNNSFTFSSLAEIEIIGCKDIPALPSEEVLGRFTALEHLEISYCENLRSLGGLMAVHSLKRVAIWDCPNLIQRASWPSTEKNETFGSIPFFLEQLETNDPLLLLETPLRNLSSVQILKIMFNKNLNSFPVEAENWLLRNCSSLRELHLWDVISLQSLPSCLHELSSLLVLDVFHTPDLKQLPELPSSLQKLMITYCHPELKERYQSDAGTDWQKIAYVPHVSICI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0043531	Molecular Function	ADP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.080
SRP064423	SRR2545915	Juvenile tuber	5.660
SRP108465	SRR5643513	five period of Gastrodia elata	5.610
	SRR5643514	five period of Gastrodia elata	5.820
	SRR5643515	five period of Gastrodia elata	5.440
	SRR5643524	five period of Gastrodia elata	6.510
	SRR5643525	five period of Gastrodia elata	4.350
	SRR5643528	five period of Gastrodia elata	4.060
	SRR5643658	five period of Gastrodia elata	3.840
	SRR5643659	five period of Gastrodia elata	5.480
	SRR5643660	five period of Gastrodia elata	4.000
	SRR5643661	five period of Gastrodia elata	4.610
	SRR5643662	five period of Gastrodia elata	3.810
	SRR5643663	five period of Gastrodia elata	5.310
	SRR5643664	five period of Gastrodia elata	3.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.420
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.630
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.510
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.580
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.210
SRP279888	Gastro	Gastrodia elata tuber	4.28
	Juven	Juvenile tuber	8.91
	Mother_Gastro	Mother tuber of Gastrodia elata	6.64
	Mother_Juven	Mother tuber of Juvenile	10.49