Detail information of GWHGAAEX012988/evm.TU.scaffold_48.132
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 2.00E-24 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|672113929|ref|XP_008813262.1| | 0 | PREDICTED: cysteine-rich receptor-like protein kinase 2 [Phoenix dactylifera] |
| Swissprot | tr|Q9CAL3|CRK2_ARATH | 1.00E-120 | Cysteine-rich receptor-like protein kinase 2 (Precursor) |
| trEMBL | tr|M0SXR2|M0SXR2_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P11830_001} |
| TAIR | AT1G70520 | 4.00E-120 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000049 | 3699680 | 3706592 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012988
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01657.16 | Stress-antifung | 31 | 123 | 2.90E-12 |
| PF01657.16 | Stress-antifung | 147 | 227 | 1.80E-10 |
| PF00069.24 | Pkinase | 317 | 552 | 1.30E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.880 |
| SRR2545915 | Juvenile tuber | 17.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.150 |
| SRR5643514 | five period of Gastrodia elata | 15.890 | |
| SRR5643515 | five period of Gastrodia elata | 17.120 | |
| SRR5643524 | five period of Gastrodia elata | 17.730 | |
| SRR5643525 | five period of Gastrodia elata | 21.760 | |
| SRR5643528 | five period of Gastrodia elata | 22.210 | |
| SRR5643658 | five period of Gastrodia elata | 21.340 | |
| SRR5643659 | five period of Gastrodia elata | 18.020 | |
| SRR5643660 | five period of Gastrodia elata | 18.020 | |
| SRR5643661 | five period of Gastrodia elata | 15.400 | |
| SRR5643662 | five period of Gastrodia elata | 13.090 | |
| SRR5643663 | five period of Gastrodia elata | 15.270 | |
| SRR5643664 | five period of Gastrodia elata | 13.970 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.930 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 25.010 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.990 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.740 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.170 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.460 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.270 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.600 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.600 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 23.22 |
| Juven | Juvenile tuber | 15.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.38 | |
| Mother_Juven | Mother tuber of Juvenile | 21.24 |