Detail information of GWHGAAEX013014/evm.TU.scaffold_48.161


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|34498467|ref|NP_902682.1|3.00E-25serine carboxypeptidase [Chromobacterium violaceum ATCC 12472]
KOGKOG12820Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|695050289|ref|XP_009413121.1|0PREDICTED: serine carboxypeptidase-like 34 [Musa acuminata subsp. malaccensis]
Swissprottr|Q0WPR4|SCP34_ARATH0Serine carboxypeptidase-like 34 (Precursor)
trEMBLtr|Q1EP77|Q1EP77_MUSAC0Carboxypeptidase {ECO:0000256|RuleBase:RU361156}
TAIRAT5G232100serine carboxypeptidase-like 34

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004946071794624619+
Transcript Sequence

Network for GWHGAAEX013014

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10444763.30E-133
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.520
SRR2545915Juvenile tuber27.700
SRP108465SRR5643513five period of Gastrodia elata23.690
SRR5643514five period of Gastrodia elata7.450
SRR5643515five period of Gastrodia elata16.010
SRR5643524five period of Gastrodia elata11.930
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.110
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata13.440
SRR5643660five period of Gastrodia elata16.100
SRR5643661five period of Gastrodia elata14.850
SRR5643662five period of Gastrodia elata16.950
SRR5643663five period of Gastrodia elata17.110
SRR5643664five period of Gastrodia elata9.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.290
SRR6049655Rhizomagastrodiae_C368-T10_good_111.090
SRR6049656Rhizomagastrodiae_C368-T07_good_18.900
SRR6049657Rhizomagastrodiae_C368-T07_good_19.320
SRR6049658Rhizomagastrodiae_C368-T04_good_18.050
SRR6049659Rhizomagastrodiae_C368-T04_good_15.280
SRR6049660Rhizomagastrodiae_C368-T01_good_17.710
SRR6049661Rhizomagastrodiae_C368-T04_good_116.370
SRR6049662Rhizomagastrodiae_C368-T01_good_19.250
SRR6049663Rhizomagastrodiae_C368-T01_good_16.860
SRR6049664Rhizomagastrodiae_C368-T10_good_110.110
SRR6049665Rhizomagastrodiae_C368-T10_good_110.110
SRP279888GastroGastrodia elata tuber 6.88
JuvenJuvenile tuber2.04
Mother_GastroMother tuber of Gastrodia elata 4.73
Mother_JuvenMother tuber of Juvenile 3.03