Detail information of GWHGAAEX013017/evm.TU.scaffold_48.165


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743831572|ref|XP_010934733.1|4.38E-69PREDICTED: remorin [Elaeis guineensis]
Swissprottr|P93788|REMO_SOLTU2.00E-64Remorin
trEMBLtr|B9RDP4|B9RDP4_RICCO4.00E-69Remorin, putative {ECO:0000313|EMBL:EEF50502.1}
TAIRAT5G237504.00E-60Remorin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004947482764752448-
Transcript Sequence

Network for GWHGAAEX013017

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03766.12Remorin_N32713.20E-14
PF03763.12Remorin_C751798.10E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.040
SRR2545915Juvenile tuber77.050
SRP108465SRR5643513five period of Gastrodia elata244.780
SRR5643514five period of Gastrodia elata183.870
SRR5643515five period of Gastrodia elata150.290
SRR5643524five period of Gastrodia elata145.680
SRR5643525five period of Gastrodia elata341.560
SRR5643528five period of Gastrodia elata324.740
SRR5643658five period of Gastrodia elata580.470
SRR5643659five period of Gastrodia elata13.010
SRR5643660five period of Gastrodia elata10.880
SRR5643661five period of Gastrodia elata11.200
SRR5643662five period of Gastrodia elata8.880
SRR5643663five period of Gastrodia elata6.990
SRR5643664five period of Gastrodia elata8.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1142.010
SRR6049655Rhizomagastrodiae_C368-T10_good_1153.930
SRR6049656Rhizomagastrodiae_C368-T07_good_1223.300
SRR6049657Rhizomagastrodiae_C368-T07_good_1105.740
SRR6049658Rhizomagastrodiae_C368-T04_good_1127.190
SRR6049659Rhizomagastrodiae_C368-T04_good_1128.030
SRR6049660Rhizomagastrodiae_C368-T01_good_172.940
SRR6049661Rhizomagastrodiae_C368-T04_good_1107.050
SRR6049662Rhizomagastrodiae_C368-T01_good_195.270
SRR6049663Rhizomagastrodiae_C368-T01_good_195.340
SRR6049664Rhizomagastrodiae_C368-T10_good_1287.800
SRR6049665Rhizomagastrodiae_C368-T10_good_1287.800
SRP279888GastroGastrodia elata tuber 24.79
JuvenJuvenile tuber35.53
Mother_GastroMother tuber of Gastrodia elata 294.99
Mother_JuvenMother tuber of Juvenile 228.19