Detail information of GWHGAAEX013029/evm.TU.scaffold_48.177


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34672.00E-66Histone H4
nrgi|195617694|gb|ACG30677.1|8.72E-66histone H4 [Zea mays]
Swissprottr|P0CG89|H4_SOYBN7.00E-67Histone H4
trEMBLtr|Q5NSW2|Q5NSW2_FRAAN5.00E-65Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment)
TAIRAT5G599702.00E-66Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004949630424963704+
Transcript Sequence

Network for GWHGAAEX013029

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15511.5CENP-T_C35961.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.920
SRR2545915Juvenile tuber13.210
SRP108465SRR5643513five period of Gastrodia elata122.870
SRR5643514five period of Gastrodia elata156.880
SRR5643515five period of Gastrodia elata98.210
SRR5643524five period of Gastrodia elata100.330
SRR5643525five period of Gastrodia elata9.860
SRR5643528five period of Gastrodia elata1.770
SRR5643658five period of Gastrodia elata6.080
SRR5643659five period of Gastrodia elata11.730
SRR5643660five period of Gastrodia elata12.880
SRR5643661five period of Gastrodia elata16.060
SRR5643662five period of Gastrodia elata10.570
SRR5643663five period of Gastrodia elata17.410
SRR5643664five period of Gastrodia elata3.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1128.530
SRR6049655Rhizomagastrodiae_C368-T10_good_1236.590
SRR6049656Rhizomagastrodiae_C368-T07_good_1198.920
SRR6049657Rhizomagastrodiae_C368-T07_good_1144.420
SRR6049658Rhizomagastrodiae_C368-T04_good_167.350
SRR6049659Rhizomagastrodiae_C368-T04_good_129.870
SRR6049660Rhizomagastrodiae_C368-T01_good_181.340
SRR6049661Rhizomagastrodiae_C368-T04_good_1114.170
SRR6049662Rhizomagastrodiae_C368-T01_good_1238.540
SRR6049663Rhizomagastrodiae_C368-T01_good_1105.900
SRR6049664Rhizomagastrodiae_C368-T10_good_1268.830
SRR6049665Rhizomagastrodiae_C368-T10_good_1268.830
SRP279888GastroGastrodia elata tuber 5.68
JuvenJuvenile tuber7.39
Mother_GastroMother tuber of Gastrodia elata 1.15
Mother_JuvenMother tuber of Juvenile 0.79