Gene detail

Detail information of GWHGAAEX013031/evm.TU.scaffold_48.179

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0768	2.00E-76	Mitochondrial carrier protein PET8
nr	gi\|743776314\|ref\|XP_010918562.1\|	0	PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q94AG6\|SAMC1_ARATH	2.00E-44	S-adenosylmethionine carrier 1, chloroplastic/mitochondrial (Precursor)
trEMBL	tr\|M0S951\|M0S951_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P18600_001}
TAIR	AT4G11440	2.00E-76	Mitochondrial substrate carrier family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000049	4972409	4976546	+

Transcript Sequence
>GWHTAAEX013031 ATGGCCTCCCAACAAGGTTTTCCCAAAAATGGCAAATCACCTCTTAATTACTGGTGGGTTCCATTGGAGGTGCAATCCTTCAAGCCAGACCTTATTGTTCTGAATGGGAATTTAGGTGCACCCCCCACTTCTTTCCCAAAAGAGGGTCTTCTACCCGAGAGAAGGGAAAACAGAGGACTCACGATTTCACATGTTCGATCAGCGGCTGCGGGAATATGGGATCGTGTTGGCCAACCTGCAATTTTTTTATCCAAAAGCATCTTCAAATGTGATAATATTTATAGCAAGCATGTCGTCTTTCAATTGGACAGTGATAGAGATGTACAAACAGTTTATGATGATACCAACAATTTTCGGAAAGATACAGAAGTTAGTAGCCAATACAAAAGTTCTGCAAACTCCAGTTTTGAAGATCTTCATGGAATTAAAAAAATGCTGCTTTTTGCTTCATGTAATAGGAACATCAACAGCTTCTATTTTCAGAGCACTGCCGCTTCAGCTGAAGAAAACAATATAGCTAATAAATTTTCCAATGGTATAGCTGGCAATATGATCCCAAAGTCTTTTTTTGGAATAAAAGATCCTGTTAATTTCACTAAAACTGGATTTCATACACTCGATGAAAGTTGCACCATTGGCAAAACTACATCTAACTTACCTGACATTCAGAATATACAAAAATTTGGCAAGTCAGTAGGCACTGACTTAGTTACAAATACTTCAGACTCAATTAAATATGGACAGAAGCTCGGCTGCTCTCTGTCTTCTCCGCATGATCTTCAATTGTCAACTTGTGCAAGGGAGGAAACAGAGATTTTGAGACAGCCAATTTCTGAATGCAAAACTAGCTGTAATGTGGACTTTATATCTTCAGCTGTAGAATCTCACGACTGCCAAAATTTGATAAATACTATTGATGTTGTGTTGAAATCTTCAAAAGAAAATTCTGCCGCCAATTATCAAAATACTAACAAAAATGAGAAGTTATTTGGCTCTCTTTCACTTGTAGAAAATTTTCCACAGCAACAATGGTTGGCTATCCAGAATAATCTTCAGCATACTTTCTCTAACAATAGGCATGCTATAGCTGGAGCACTAGCTGGAACACTAGTCACCCTTTGTCTGCATCCTGTTGATACAGTCAAGACTATCATTCAAGCAAATGCAACGGGTCAAAAATCATTTTATCGCATTGTCAGAAGAATCATATCTCAGCATGGGATACTTGGACTTTACCGTGGAATTGCAAGTAATATTACTTCTTCAGCTCCAATCTCTGCAATTTATACATTTACTTATGAATCTGTGAAGTGTACTCTTCTGCCTCTTCTGCCAAAGGAATACCATTCTTTAGCTCATTGTATTGCCGGCGGTTGTTCAAGTGTAGCAACCTCCTTTGTCTTTACTCCAAGTGAACGCATAAAGCAGCAAATGCAAGTTGGTTCACAGTATCAAAATTGTTGGAAAGCTTTAATAGGATGTCTTCAAAAGGGTGGCATACCCTCATTATATGCAGGATGGGGTGCAGTGCTTTGCAGGAACATTCCTCACTCTATTATTAAGTTCTATACCTACGAAAGTTTGAAGCAATTTTTCTCATCAGCATATCCTGATTCCAGTTTCCAAACTTTTCACACGCTTATTTGTGGAGGACTTGCTGGATCTACTGCTGCTCTATTTACAACTCCTTTTGATGTTGTGAAGACAAGACTTCAAACACAGCCTCCTGGATCTATTGGAAAATACCACGGTGTTGTTCATGCGCTTCAGGAAATTGCTAGACAAGAAGGCCTTCCGGGTCTCTACAGAGGGTTGGCTCCAAGATTAGCCATGTATGTGTCCCAAGGAGCTATTTTCTTCGCTTCATATGAGTTCCTCAAAGCTATATTTCTTTTGGAAGCATCACAAAATACTTCAAAAATGAAGGAAGATGAGATGAGTTCAGATAGTCCTGCAGCAGCAGGATTACAGAAGCAGCCTGCATAA

Network for GWHGAAEX013031

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.26	Mito_carr	359	439	1.50E-18
PF00153.26	Mito_carr	448	533	3.20E-15
PF00153.26	Mito_carr	542	631	1.70E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.810
SRP064423	SRR2545915	Juvenile tuber	19.020
SRP108465	SRR5643513	five period of Gastrodia elata	2.500
	SRR5643514	five period of Gastrodia elata	4.770
	SRR5643515	five period of Gastrodia elata	4.780
	SRR5643524	five period of Gastrodia elata	8.640
	SRR5643525	five period of Gastrodia elata	1.680
	SRR5643528	five period of Gastrodia elata	1.320
	SRR5643658	five period of Gastrodia elata	1.990
	SRR5643659	five period of Gastrodia elata	1.200
	SRR5643660	five period of Gastrodia elata	0.390
	SRR5643661	five period of Gastrodia elata	1.260
	SRR5643662	five period of Gastrodia elata	0.560
	SRR5643663	five period of Gastrodia elata	0.730
	SRR5643664	five period of Gastrodia elata	0.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.550
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.020
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.100
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.440
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.500
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.790
SRP279888	Gastro	Gastrodia elata tuber	0.59
	Juven	Juvenile tuber	0.65
	Mother_Gastro	Mother tuber of Gastrodia elata	0.31
	Mother_Juven	Mother tuber of Juvenile	0.22