Detail information of GWHGAAEX013033/evm.TU.scaffold_48.181
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332667208|ref|YP_004449996.1| | 6.00E-09 | fatty acid hydroxylase [Haliscomenobacter hydrossis DSM 1100] |
| KOG | KOG0873 | 2.00E-146 | C-4 sterol methyl oxidase |
| nr | gi|695074720|ref|XP_009384576.1| | 5.59E-165 | PREDICTED: methylsterol monooxygenase 1-1-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q8L7W5|SMO11_ARATH | 7.00E-147 | Methylsterol monooxygenase 1-1 |
| trEMBL | tr|M0RUD7|M0RUD7_MUSAM | 2.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P22070_001} |
| TAIR | AT4G12110 | 2.00E-146 | sterol-4alpha-methyl oxidase 1-1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000049 | 5007701 | 5021885 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013033
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04116.12 | FA_hydroxylase | 132 | 266 | 1.10E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14423 | SMO1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Steroid biosynthesis | map00100 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008610 | Biological Process | lipid biosynthetic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 98.530 |
| SRR2545915 | Juvenile tuber | 65.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 110.250 |
| SRR5643514 | five period of Gastrodia elata | 93.510 | |
| SRR5643515 | five period of Gastrodia elata | 97.080 | |
| SRR5643524 | five period of Gastrodia elata | 88.210 | |
| SRR5643525 | five period of Gastrodia elata | 129.060 | |
| SRR5643528 | five period of Gastrodia elata | 99.100 | |
| SRR5643658 | five period of Gastrodia elata | 110.810 | |
| SRR5643659 | five period of Gastrodia elata | 83.930 | |
| SRR5643660 | five period of Gastrodia elata | 80.190 | |
| SRR5643661 | five period of Gastrodia elata | 79.770 | |
| SRR5643662 | five period of Gastrodia elata | 57.780 | |
| SRR5643663 | five period of Gastrodia elata | 63.160 | |
| SRR5643664 | five period of Gastrodia elata | 61.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 107.520 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 139.630 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 97.700 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 128.180 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 123.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 150.230 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 120.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 111.580 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 84.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 90.580 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 101.760 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 101.760 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 60.80 |
| Juven | Juvenile tuber | 91.90 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 122.42 | |
| Mother_Juven | Mother tuber of Juvenile | 112.00 |