Detail information of GWHGAAEX013034/evm.TU.scaffold_48.182


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779469|ref|YP_002430787.1|3.00E-48peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01]
KOGKOG12820Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|695070229|ref|XP_009382132.1|0PREDICTED: serine carboxypeptidase-like [Musa acuminata subsp. malaccensis]
Swissprottr|P37891|CBP3_ORYSJ0Serine carboxypeptidase 3 (Precursor)
trEMBLtr|M0RNM5|M0RNM5_MUSAM0Carboxypeptidase {ECO:0000256|RuleBase:RU361156}
TAIRAT3G104100SERINE CARBOXYPEPTIDASE-LIKE 49

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004950381525092942-
Transcript Sequence

Network for GWHGAAEX013034

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10824813.40E-121
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms97.550
SRR2545915Juvenile tuber145.180
SRP108465SRR5643513five period of Gastrodia elata180.690
SRR5643514five period of Gastrodia elata176.940
SRR5643515five period of Gastrodia elata166.390
SRR5643524five period of Gastrodia elata181.920
SRR5643525five period of Gastrodia elata225.360
SRR5643528five period of Gastrodia elata212.010
SRR5643658five period of Gastrodia elata356.890
SRR5643659five period of Gastrodia elata75.860
SRR5643660five period of Gastrodia elata73.080
SRR5643661five period of Gastrodia elata77.970
SRR5643662five period of Gastrodia elata62.870
SRR5643663five period of Gastrodia elata69.120
SRR5643664five period of Gastrodia elata72.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1215.800
SRR6049655Rhizomagastrodiae_C368-T10_good_1282.080
SRR6049656Rhizomagastrodiae_C368-T07_good_1219.410
SRR6049657Rhizomagastrodiae_C368-T07_good_1159.650
SRR6049658Rhizomagastrodiae_C368-T04_good_1174.150
SRR6049659Rhizomagastrodiae_C368-T04_good_1174.300
SRR6049660Rhizomagastrodiae_C368-T01_good_1144.310
SRR6049661Rhizomagastrodiae_C368-T04_good_1154.610
SRR6049662Rhizomagastrodiae_C368-T01_good_1193.220
SRR6049663Rhizomagastrodiae_C368-T01_good_1159.790
SRR6049664Rhizomagastrodiae_C368-T10_good_1345.320
SRR6049665Rhizomagastrodiae_C368-T10_good_1345.320
SRP279888GastroGastrodia elata tuber 88.62
JuvenJuvenile tuber90.96
Mother_GastroMother tuber of Gastrodia elata 219.31
Mother_JuvenMother tuber of Juvenile 126.12